RNA–Protein interactions for RNA: ENST00000600962.5

SOX2-OT-235, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 472 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-235ENST00000600962 VPREB3Q9UKI3 123 aa10.97□□□□□ -0.65
SOX2-OT-235ENST00000600962 HSF4Q9ULV5 492 aa10.97□□□□□ -0.65
SOX2-OT-235ENST00000600962 PSG11Q9UQ72 335 aa10.97□□□□□ -0.65
SOX2-OT-235ENST00000600962 HILPDAQ9Y5L2 63 aa10.97□□□□□ -0.65
SOX2-OT-235ENST00000600962 DSCAML1Q8TD84 2053 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 BTBD17A6NE02 478 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 F2RL2O00254 374 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 TOR1AO14656 332 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 AIREO43918 545 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 NAPSAO96009 420 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 HBZP02008 142 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 RAB6AP20340 208 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 GNG10P50151 68 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 LOXL3P58215 753 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 RELBQ01201 579 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 FAM189A2Q15884 450 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 MOGAT2Q3SYC2 334 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 GDPGP1Q6ZNW5 385 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 PRR18Q8N4B5 295 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 OR56B1Q8NGI3 324 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 OR13F1Q8NGS4 319 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 OR9G1Q8NH87 305 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 HDHD3Q9BSH5 251 aaPredicted RBP10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 PECRQ9BY49 303 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 MMP28Q9H239 520 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 DPM3Q9P2X0 92 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 AK3Q9UIJ7 227 aa10.96□□□□□ -0.65
SOX2-OT-235ENST00000600962 DNHD1Q96M86 4753 aa10.96□□□□□ -0.66
SOX2-OT-235ENST00000600962 COL6A5A8TX70 2615 aa10.96□□□□□ -0.66
SOX2-OT-235ENST00000600962 IGHV3-43A0A0B4J1X8 118 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 LY6LH3BQJ8 138 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 J3QR06 171 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 SDCBPO00560 298 aaPredicted RBP10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 SPINT2O43291 252 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 IGHV3-43DP0DP04 118 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 SNRPBP14678 240 aaKnown RBP10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 COMPP49747 757 aaPredicted RBP10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 RAB13P51153 203 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 PRRX1P54821 245 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 LSM3P62310 102 aaKnown RBP10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 LY6EQ16553 131 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 OLFML2AQ68BL7 652 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 TRAT1Q6PIZ9 186 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 OR52M1Q8NGK5 317 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 PTX4Q96A99 478 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 FUNDC2Q9BWH2 189 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 TAF9BQ9HBM6 251 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 GFOD1Q9NXC2 390 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 C1RLQ9NZP8 487 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 KCNK7Q9Y2U2 307 aa10.95□□□□□ -0.66
SOX2-OT-235ENST00000600962 A0A1W2PPE3 182 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 LEUTXA8MZ59 168 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 RAB27BO00194 218 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 DYNLT3P51808 116 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 RPL15P61313 204 aaKnown RBP10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 HMGN3Q15651 99 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 AWAT1Q58HT5 328 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 TPTE2P1Q5T6R2 138 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 ZNF880Q6PDB4 577 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 SLC16A12Q6ZSM3 486 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 Q6ZTK2 550 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 ZNF554Q86TJ5 538 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 OR10R2Q8NGX6 335 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 LGALS14Q8TCE9 139 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 MRPS26Q9BYN8 205 aaKnown RBP10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 CHMP1AQ9HD42 196 aaPredicted RBP10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 KCNIP1Q9NZI2 227 aa10.94□□□□□ -0.66
SOX2-OT-235ENST00000600962 TRBV6-6A0A0A6YYG2 114 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 CHST1O43916 411 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 CRYBA1P05813 215 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 DIAPH2-AS1Q14236 149 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 GNMTQ14749 295 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 TMEM30BQ3MIR4 351 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 CCBE1Q6UXH8 406 aaPredicted RBP10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 ZNF439Q8NDP4 499 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 OR10V1Q8NGI7 309 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 CREB3L1Q96BA8 519 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 RAB3CQ96E17 227 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 RIMS4Q9H426 269 aaPredicted RBP10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 RAB9BQ9NP90 201 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 C12orf4Q9NQ89 552 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 ABCB10Q9NRK6 738 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 GNG12Q9UBI6 72 aa10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 AMMECR1Q9Y4X0 333 aaPredicted RBP10.93□□□□□ -0.66
SOX2-OT-235ENST00000600962 METTL21EPA6NDL7 271 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 A6NDX4 124 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 MFNGO00587 321 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 SLC31A2O15432 143 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 NDUFA7O95182 113 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 TFAP2AP05549 437 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 HIST1H1DP16402 221 aaKnown RBP10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 GNB3P16520 340 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 MDKP21741 143 aaPredicted RBP10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 RPS19P39019 145 aaKnown RBP10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 CEACAM3P40198 252 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 ZNF134P52741 427 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 RAG2P55895 527 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 NCS1P62166 190 aa10.92□□□□□ -0.66
SOX2-OT-235ENST00000600962 FOXL1Q12952 345 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms