RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CEACAM3P40198 252 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 LRRC75BQ2VPJ9 315 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 BAIAP2L2Q6UXY1 529 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 MOB1BQ7L9L4 216 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 OR10R2Q8NGX6 335 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 NDNFQ8TB73 568 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 C17orf50Q8WW18 174 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 RAB3CQ96E17 227 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 ARHGAP5-AS1Q96IT6 56 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 ETV7Q9Y603 341 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 LEUTXA8MZ59 168 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 RAB27BO00194 218 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 IGHV4-59P01825 116 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 RCC1P18754 421 aaPredicted RBP20.87■□□□□ 0.93
TRIM28-204ENST00000594806 ALDH3B2P48448 385 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 EFNB2P52799 333 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 PLA2G7Q13093 441 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 HLA-DRB5Q30154 266 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 ANKRD13BQ86YJ7 626 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.87■□□□□ 0.93
TRIM28-204ENST00000594806 C8orf31Q8N9H6 132 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 SSX3Q99909 188 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 MMP28Q9H239 520 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 TAF9BQ9HBM6 251 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 AK3Q9UIJ7 227 aa20.87■□□□□ 0.93
TRIM28-204ENST00000594806 AMMECR1Q9Y4X0 333 aaPredicted RBP20.87■□□□□ 0.93
TRIM28-204ENST00000594806 J3QR06 171 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 SDCBPO00560 298 aaPredicted RBP20.86■□□□□ 0.93
TRIM28-204ENST00000594806 TFAP2AP05549 437 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 LSM3P62310 102 aaKnown RBP20.86■□□□□ 0.93
TRIM28-204ENST00000594806 PLAC9Q5JTB6 97 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 IDNKQ5T6J7 187 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 ZNF880Q6PDB4 577 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 CHIAQ9BZP6 476 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 ATG5Q9H1Y0 275 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 CHMP1AQ9HD42 196 aaPredicted RBP20.86■□□□□ 0.93
TRIM28-204ENST00000594806 GFOD1Q9NXC2 390 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 ABRACLQ9P1F3 81 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 VPREB3Q9UKI3 123 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 PSG11Q9UQ72 335 aa20.86■□□□□ 0.93
TRIM28-204ENST00000594806 FBN1P35555 2871 aaKnown RBP20.85■□□□□ 0.93
TRIM28-204ENST00000594806 FAM172BPA6NC97 362 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 SERPINE3A8MV23 424 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 OOSP1A8MZH6 123 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 BUB1B-PAK6H3BSN5 160 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 HBZP02008 142 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 DYNLT3P51808 116 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 ARHGDIBP52566 201 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 LOXL3P58215 753 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 ACTG1P63261 375 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 SSX2Q16385 188 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 LTC4SQ16873 150 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 GPR141Q7Z602 305 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 CMSS1Q9BQ75 279 aaKnown RBP20.85■□□□□ 0.93
TRIM28-204ENST00000594806 C12orf4Q9NQ89 552 aa20.85■□□□□ 0.93
TRIM28-204ENST00000594806 SNRPBP14678 240 aaKnown RBP20.84■□□□□ 0.93
TRIM28-204ENST00000594806 RPS19P39019 145 aaKnown RBP20.84■□□□□ 0.93
TRIM28-204ENST00000594806 MRPS15P82914 257 aaKnown RBP20.84■□□□□ 0.93
TRIM28-204ENST00000594806 HTD2P86397 168 aa20.84■□□□□ 0.93
TRIM28-204ENST00000594806 HMGN3Q15651 99 aa20.84■□□□□ 0.93
TRIM28-204ENST00000594806 LDLRAD2Q5SZI1 272 aa20.84■□□□□ 0.93
TRIM28-204ENST00000594806 LINC00311Q8N616 119 aa20.84■□□□□ 0.93
TRIM28-204ENST00000594806 SPATA3Q8NHX4 192 aa20.84■□□□□ 0.93
TRIM28-204ENST00000594806 LGALS14Q8TCE9 139 aa20.84■□□□□ 0.93
TRIM28-204ENST00000594806 GALMQ96C23 342 aa20.84■□□□□ 0.93
TRIM28-204ENST00000594806 TMEM89A2RUT3 159 aa20.83■□□□□ 0.93
TRIM28-204ENST00000594806 GABARAPO95166 117 aa20.83■□□□□ 0.93
TRIM28-204ENST00000594806 CRYBA1P05813 215 aa20.83■□□□□ 0.93
TRIM28-204ENST00000594806 HIST1H1DP16402 221 aaKnown RBP20.83■□□□□ 0.93
TRIM28-204ENST00000594806 MOGAT2Q3SYC2 334 aa20.83■□□□□ 0.93
TRIM28-204ENST00000594806 STEAP3Q658P3 488 aa20.83■□□□□ 0.93
TRIM28-204ENST00000594806 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.83■□□□□ 0.932e-6■■■□□ 16
TRIM28-204ENST00000594806 ABCB10Q9NRK6 738 aa20.83■□□□□ 0.93
TRIM28-204ENST00000594806 TNFRSF19Q9NS68 423 aa20.83■□□□□ 0.93
TRIM28-204ENST00000594806 GNG12Q9UBI6 72 aa20.83■□□□□ 0.93
TRIM28-204ENST00000594806 SPATA2Q9UM82 520 aa20.83■□□□□ 0.93
TRIM28-204ENST00000594806 H3BUX3 64 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 MFNGO00587 321 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 CD3GP09693 182 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 HKR1P10072 659 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 TGFBR1P36897 503 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 LY6G6FQ5SQ64 297 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 CCDC144NLQ6NUI1 221 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 LIAT1Q6ZQX7 453 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 DYNAPQ8N1N2 210 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 PRR18Q8N4B5 295 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 OR1L1Q8NH94 360 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 GCDHQ92947 438 aaPredicted RBP20.82■□□□□ 0.92
TRIM28-204ENST00000594806 SLC25A46Q96AG3 418 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 OR2S2Q9NQN1 319 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 RHBDL2Q9NX52 303 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 JPT1Q9UK76 154 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 KCNK7Q9Y2U2 307 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 HILPDAQ9Y5L2 63 aa20.82■□□□□ 0.92
TRIM28-204ENST00000594806 A0A0A6YYH2 397 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 A6NJ64 397 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 LY6LH3BQJ8 138 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 SERPINB10P48595 397 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 VBP1P61758 197 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 NCS1P62166 190 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms