RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 RANBP3Q9H6Z4 567 aaPredicted RBP16.58■□□□□ 0.24
SRSF1-206ENST00000583741 GEMIN2O14893 280 aaKnown RBP16.57■□□□□ 0.24
SRSF1-206ENST00000583741 MNDAP41218 407 aa16.57■□□□□ 0.24
SRSF1-206ENST00000583741 SNU13P55769 128 aaKnown RBP16.57■□□□□ 0.24
SRSF1-206ENST00000583741 PYDC2Q56P42 97 aa16.57■□□□□ 0.24
SRSF1-206ENST00000583741 CHST4Q8NCG5 386 aa16.57■□□□□ 0.24
SRSF1-206ENST00000583741 C15orf40Q8WUR7 153 aa16.57■□□□□ 0.24
SRSF1-206ENST00000583741 SRRQ9GZT4 340 aa16.57■□□□□ 0.24
SRSF1-206ENST00000583741 MEGF9Q9H1U4 602 aa16.57■□□□□ 0.24
SRSF1-206ENST00000583741 HES4Q9HCC6 221 aa16.57■□□□□ 0.24
SRSF1-206ENST00000583741 NLKQ9UBE8 527 aa16.57■□□□□ 0.24
SRSF1-206ENST00000583741 IL36RNQ9UBH0 155 aa16.57■□□□□ 0.24
SRSF1-206ENST00000583741 IGKV1D-17A0A075B6S4 117 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 OR2AT4A6NND4 320 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 SOCS1O15524 211 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 TPPPO94811 219 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 GLRA1P23415 457 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 NSUN5P1Q3KNT7 163 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 SNX29P2Q8IUI4 249 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 ZNRF1Q8ND25 227 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 RAB3CQ96E17 227 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 ABHD1Q96SE0 405 aa16.56■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A10PA6NDY2 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A18PA6NE21 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A16PA6NEW6 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A20PA6NIJ5 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A8PA6NJQ4 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A7PA6NKC0 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A22PA8MWA6 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A12PA8MX19 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A5PA8MXJ8 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A23PA8MXZ1 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 HLA-DQB1P01920 261 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A15PP0C7V4 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A13PP0C7W8 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A14PP0C7W9 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FAM90A24PP0C7X0 464 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 BLVRBP30043 206 aaPredicted RBP16.55■□□□□ 0.24
SRSF1-206ENST00000583741 LOXL3P58215 753 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 IL13RA2Q14627 380 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 SMIM21Q3B7S5 101 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 ACP7Q6ZNF0 438 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 LINC00596Q86U02 117 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 GDPD1Q8N9F7 314 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 OR5D13Q8NGL4 314 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 PIFOQ8TCI5 191 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 MMP28Q9H239 520 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 AURKAIP1Q9NWT8 199 aaPredicted RBP16.55■□□□□ 0.24
SRSF1-206ENST00000583741 ZNF222Q9UK12 451 aa16.55■□□□□ 0.24
SRSF1-206ENST00000583741 FOXI3A8MTJ6 420 aaPredicted RBP16.54■□□□□ 0.24
SRSF1-206ENST00000583741 OR7C1O76099 320 aaPredicted RBP16.54■□□□□ 0.24
SRSF1-206ENST00000583741 GABRA2P47869 451 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 HABP2Q14520 560 aaPredicted RBP16.54■□□□□ 0.24
SRSF1-206ENST00000583741 AANATQ16613 207 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 MPV17LQ2QL34 196 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 FAM185AQ8N0U4 392 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 TMEM185AQ8NFB2 350 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 BORCS5Q969J3 196 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 SDHCQ99643 169 aaPredicted RBP16.54■□□□□ 0.24
SRSF1-206ENST00000583741 NPFFR1Q9GZQ6 430 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 RAB18Q9NP72 206 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 C19orf12Q9NSK7 152 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 NECAP2Q9NVZ3 263 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 RASL12Q9NYN1 266 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 CD28P10747 220 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 PSG2P11465 335 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 HIST1H1DP16402 221 aaKnown RBP16.54■□□□□ 0.24
SRSF1-206ENST00000583741 TMEM50BP56557 158 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 PLAC9Q5JTB6 97 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 SPIN3Q5JUX0 258 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 SIGIRRQ6IA17 410 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 Q8N402 240 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 ARHGAP5-AS1Q96IT6 56 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 CCDC32Q9BV29 185 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 AUNIPQ9H7T9 357 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 ZNF702PQ9H963 129 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 SERTAD4Q9NUC0 356 aa16.54■□□□□ 0.24
SRSF1-206ENST00000583741 TRBV23-1A0A0A0MS06 115 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 CTDSPLO15194 276 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 FBXO24O75426 580 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 PTHLHP12272 177 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 DUSP1P28562 367 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 MRPS10P82664 201 aaKnown RBP16.53■□□□□ 0.24
SRSF1-206ENST00000583741 ARL6IP1Q15041 203 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 ZNF146Q15072 292 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 ZNF260Q3ZCT1 412 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 CDNFQ49AH0 187 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 NKAPLQ5M9Q1 402 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 NEDD4LQ96PU5 975 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 ZNF581Q9P0T4 197 aa16.53■□□□□ 0.24
SRSF1-206ENST00000583741 TMEM235A6NFC5 223 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 ADARB2-AS1A8MUL3 147 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 H3BUI4 141 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 MFNGO00587 321 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 PDCD6O75340 191 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 GSTP1P09211 210 aaKnown RBP16.52■□□□□ 0.23
SRSF1-206ENST00000583741 GNB3P16520 340 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 CHATP28329 748 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 ATAD3CQ5T2N8 411 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 RTN4RL2Q86UN3 420 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms