RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 LSM4Q9Y4Z0 139 aaKnown RBP11.43□□□□□ -0.58
CDC42EP4-208ENST00000582303 MCRIP1C9JLW8 97 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 C15orf65H3BRN8 121 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 GEMIN2O14893 280 aaKnown RBP11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 CDRT1O95170 752 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 IGF1P05019 195 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 SERPINA2P20848 420 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 BDKRB2P30411 391 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 LUMP51884 338 aaPredicted RBP11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 ZNF137PP52743 207 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 ZNF497Q6ZNH5 498 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 TMEM104Q8NE00 496 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 RHOXF1Q8NHV9 184 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 PYDC1Q8WXC3 89 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 MRPS18AQ9NVS2 196 aaKnown RBP11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 TRAPPC2LQ9UL33 140 aa11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 ZNF256Q9Y2P7 627 aaPredicted RBP11.42□□□□□ -0.58
CDC42EP4-208ENST00000582303 TRAV39A0A0B4J263 110 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 IRGMA1A4Y4 181 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 LINC01548A6NM66 108 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 E9PI62 339 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 CA11O75493 328 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 MT-ND4P03905 459 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 OR8U8P0C7N1 319 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 GABRB1P18505 474 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 MED21Q13503 144 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 RIPK1Q13546 671 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 DEFB136Q30KP8 78 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 FAM27D1Q5T7N8 215 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 SLC25A48Q6ZT89 311 aaKnown RBP11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 CBR4Q8N4T8 237 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 FAM71E2Q8N5Q1 922 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 OR52I1Q8NGK6 324 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 CCDC107Q8WV48 283 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 ST6GALNAC6Q969X2 333 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 C9orf16Q9BUW7 83 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 AMBNQ9NP70 447 aa11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 ZNF107Q9UII5 783 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP4-208ENST00000582303 DYNC1I1O14576 645 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 DCKP27707 260 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 PSMB8P28062 276 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 CHATP28329 748 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 FHL3Q13643 280 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 ZNF260Q3ZCT1 412 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 SLC22A6Q4U2R8 563 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 OR11H1Q8NG94 326 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 UBE2E2Q96LR5 201 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 KCTD7Q96MP8 289 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 PRR25Q96S07 402 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 PLSCR3Q9NRY6 295 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 ERGIC3Q9Y282 383 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 SMAD5-AS1Q9Y6J3 95 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 STAB2Q8WWQ8 2551 aa11.4□□□□□ -0.58
CDC42EP4-208ENST00000582303 LOC100130705A0A1B0GUX0 176 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 LANCL1O43813 399 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 MYL12AP19105 171 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 GTF2A1P52655 376 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 CFHR3Q02985 330 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 MMDQ15546 238 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 SYT6Q5T7P8 510 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 ZNF554Q86TJ5 538 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 ZNF429Q86V71 674 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 SMIM19Q96E16 107 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 ZNF184Q99676 751 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 ETAA1Q9NY74 926 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 KCNIP1Q9NZI2 227 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 VSIG4Q9Y279 399 aa11.39□□□□□ -0.59
CDC42EP4-208ENST00000582303 IGHV3-43A0A0B4J1X8 118 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 C12orf77C9JDV5 145 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 LY86O95711 162 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 GLAP06280 429 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 IGHV3-43DP0DP04 118 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 RUNX1Q01196 453 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 ZNF616Q08AN1 781 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 CDH26Q8IXH8 852 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 PRR18Q8N4B5 295 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 RGP1Q92546 391 aaPredicted RBP11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 HSPB9Q9BQS6 159 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 ZNF251Q9BRH9 671 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 FGF20Q9NP95 211 aaPredicted RBP11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 BABAM2Q9NXR7 383 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 RCC2Q9P258 522 aaKnown RBP11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 AASSQ9UDR5 926 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 SCOCQ9UIL1 159 aa11.38□□□□□ -0.59
CDC42EP4-208ENST00000582303 FAM90A10PA6NDY2 464 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 FAM90A7PA6NKC0 464 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 FAM90A23PA8MXZ1 464 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 RGS11O94810 467 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 HBZP02008 142 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 LIMS3P0CW19 117 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 LIMS4P0CW20 117 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 LSAMPQ13449 338 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 YIF1BQ5BJH7 314 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 RAB12Q6IQ22 244 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 ZNF439Q8NDP4 499 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 ZNF555Q8NEP9 628 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 OR1N2Q8NGR9 330 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 UBALD1Q8TB05 177 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 GHITMQ9H3K2 345 aa11.37□□□□□ -0.59
CDC42EP4-208ENST00000582303 OR2S2Q9NQN1 319 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms