RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SDCBPO00560 298 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 SPINT2O43291 252 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 UBBP0CG47 229 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 CD37P11049 281 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 SERPINA2P20848 420 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 WNT4P56705 351 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 RPL23AP62750 156 aaKnown RBP11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 DCTN2Q13561 401 aaKnown RBP11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 HIST2H2BDQ6DRA6 164 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 C8orf59Q8N0T1 100 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 MS4A15Q8N5U1 240 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 ZNF439Q8NDP4 499 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 MRAPQ8TCY5 172 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 EAF1Q96JC9 268 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 DERL3Q96Q80 235 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 FKBP14Q9NWM8 211 aa11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 MRPS28Q9Y2Q9 187 aaKnown RBP11.46□□□□□ -0.57
SMARCE1-216ENST00000580419 TRAV8-7A0A075B6U6 113 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 AIPO00170 330 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 LANCL1O43813 399 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 IGKV1D-33P01593 117 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 IGKV1-33P01594 117 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 FUT3P21217 361 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 CAPGP40121 348 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 MYCNOSP40205 109 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 THBS3P49746 956 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 GPR50Q13585 617 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 HES1Q14469 280 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 ATAD3CQ5T2N8 411 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 TEX38Q6PEX7 206 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 SLC35E3Q7Z769 313 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 CYGBQ8WWM9 190 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 PHYHIPQ92561 330 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 LEAP2Q969E1 77 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 Q96M66 194 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 OR14A2Q96R54 314 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 PLSCR3Q9NRY6 295 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 ZNF581Q9P0T4 197 aa11.45□□□□□ -0.58
SMARCE1-216ENST00000580419 SERPINE3A8MV23 424 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 C12orf77C9JDV5 145 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 MOSP00540 346 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 IGLL1P15814 213 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 HTD2P86397 168 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 DIAPH2-AS1Q14236 149 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 SYT6Q5T7P8 510 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 OGFRL1Q5TC84 451 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 RAB12Q6IQ22 244 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 GLIPR1L1Q6UWM5 242 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 UNQ9370/PRO34162Q6UXP9 181 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 OR2W3Q7Z3T1 314 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 STPG2Q8N412 459 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 NANOGP1Q8N7R0 232 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 OR13C5Q8NGS8 318 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 P2RX4Q99571 388 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 CST11Q9H112 138 aa11.44□□□□□ -0.58
SMARCE1-216ENST00000580419 A0A1W2PP11 408 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 A0A1W2PRX2 142 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 MAGEA13PA6NCF6 341 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 H0YHG0 523 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 RRP9O43818 475 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 IGF1P05019 195 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 ELANEP08246 267 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 MGMTP16455 207 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 CELP19835 753 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 VHLP40337 213 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 RANBP1P43487 201 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 GNG10P50151 68 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 FOXE3Q13461 319 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 PNLIPRP3Q17RR3 467 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 C9orf152Q5JTZ5 239 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 AWAT2Q6E213 333 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 LAIR2Q6ISS4 152 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 ETV3LQ6ZN32 361 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 MRPL41Q8IXM3 137 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 JAGN1Q8N5M9 183 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 FAM71E2Q8N5Q1 922 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 Q8N9W7 124 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 NEK7Q8TDX7 302 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 DPF1Q92782 380 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 MUL1Q969V5 352 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 GHITMQ9H3K2 345 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 ETAA1Q9NY74 926 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 JPT1Q9UK76 154 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 TRAPPC2LQ9UL33 140 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 ERGIC3Q9Y282 383 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 PEX16Q9Y5Y5 336 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 TENM3Q9P273 2699 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 SORL1Q92673 2214 aa11.43□□□□□ -0.58
SMARCE1-216ENST00000580419 MYL12BO14950 172 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 PDCD6O75340 191 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 HBZP02008 142 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 OR5H8P0DN80 308 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 GPR12P47775 334 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 CDX1P47902 265 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 LRRC36Q1X8D7 754 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 CT45A1Q5HYN5 189 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 C1orf100Q5SVJ3 147 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 C6orf141Q5SZD1 244 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 SIGIRRQ6IA17 410 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms