RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 SOX2P48431 317 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 KCNJ3P48549 501 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 INSL3P51460 131 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 RUNX1Q01196 453 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 RSU1Q15404 277 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 CT45A1Q5HYN5 189 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 HAPLN4Q86UW8 402 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 ACBD7Q8N6N7 88 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 OR10V1Q8NGI7 309 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 OR52M1Q8NGK5 317 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 CT45A3Q8NHU0 189 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 LGALS12Q96DT0 336 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 GPER1Q99527 375 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 ALG8Q9BVK2 526 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 ZNF580Q9UK33 172 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 ST3GAL6Q9Y274 331 aa14.83□□□□□ -0.04
NUP88-203ENST00000572019 TNCP24821 2201 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 TMEM30CPA0ZSE6 113 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 OVOL1O14753 267 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 SAP30O75446 220 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 FASP25445 335 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 ZNF137PP52743 207 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 RBM11P57052 281 aaKnown RBP14.82□□□□□ -0.04
NUP88-203ENST00000572019 FAM27D1Q5T7N8 215 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 SLC25A48Q6ZT89 311 aaKnown RBP14.82□□□□□ -0.04
NUP88-203ENST00000572019 C8orf31Q8N9H6 132 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 TSEN15Q8WW01 171 aaKnown RBP14.82□□□□□ -0.04
NUP88-203ENST00000572019 ORAI1Q96D31 301 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 EDA2RQ9HAV5 297 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 ENOPH1Q9UHY7 261 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 DHDHQ9UQ10 334 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 VSIG4Q9Y279 399 aa14.82□□□□□ -0.04
NUP88-203ENST00000572019 EXOGQ9Y2C4 368 aaKnown RBP14.82□□□□□ -0.04
NUP88-203ENST00000572019 SAC3D1A6NKF1 404 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 C12orf77C9JDV5 145 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 SOX15O60248 233 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 MT-ND4P03905 459 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 GZMHP20718 246 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 LSAMPQ13449 338 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 ZNF429Q86V71 674 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 OR8H1Q8NGG4 311 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 OR1L1Q8NH94 360 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 TM2D3Q9BRN9 247 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 IFT22Q9H7X7 185 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 FBXO7Q9Y3I1 522 aa14.81□□□□□ -0.04
NUP88-203ENST00000572019 IGHV7-81A0A0B4J1V7 117 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 MAGEA13PA6NCF6 341 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 FAM90A10PA6NDY2 464 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 RAB3AP20336 220 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 SERPINA2P20848 420 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 RAB9AP51151 201 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 GTF2A1P52655 376 aaPredicted RBP14.8□□□□□ -0.04
NUP88-203ENST00000572019 NDPQ00604 133 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 GABPB1Q06547 395 aaPredicted RBP14.8□□□□□ -0.04
NUP88-203ENST00000572019 MMDQ15546 238 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 SRSF7Q16629 238 aaKnown RBP eCLIP14.8□□□□□ -0.04
NUP88-203ENST00000572019 ZNF497Q6ZNH5 498 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 OR52N1Q8NH53 320 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 OR5AK2Q8NH90 309 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 ARPC1AQ92747 370 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 PARP11Q9NR21 331 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 TPSG1Q9NRR2 321 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 IMPAD1Q9NX62 359 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 ING4Q9UNL4 249 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 AP4S1Q9Y587 144 aa14.8□□□□□ -0.04
NUP88-203ENST00000572019 IGHV4OR15-8A0A075B7B6 117 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 A0A087WW49 117 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 TMEM212A6NML5 194 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 ORC5O43913 435 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 IL3RAP26951 378 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 BLVRBP30043 206 aaPredicted RBP14.79□□□□□ -0.04
NUP88-203ENST00000572019 ADARB1P78563 741 aaKnown RBP14.79□□□□□ -0.04
NUP88-203ENST00000572019 GALEQ14376 348 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 GNMTQ14749 295 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 NHLRC3Q5JS37 347 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 ATAD3CQ5T2N8 411 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 XAF1Q6GPH4 301 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 OR51J1Q9H342 316 aa14.79□□□□□ -0.04
NUP88-203ENST00000572019 AIPO00170 330 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 OR5H8P0DN80 308 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 SNRPBP14678 240 aaKnown RBP14.78□□□□□ -0.04
NUP88-203ENST00000572019 SNRPGP62308 76 aaKnown RBP14.78□□□□□ -0.04
NUP88-203ENST00000572019 C19orf54Q5BKX5 351 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 SLC25A30Q5SVS4 291 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 TMEM65Q6PI78 240 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 ODF3L1Q8IXM7 274 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 Q8N1Y9 231 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 PRR18Q8N4B5 295 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 OR4K15Q8NH41 348 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 JAM3Q9BX67 310 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 ANKRD60Q9BZ19 345 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 ZMAT4Q9H898 229 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 AMBNQ9NP70 447 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 IL36GQ9NZH8 169 aa14.78□□□□□ -0.04
NUP88-203ENST00000572019 TRAV41A0A0B4J266 112 aa14.77□□□□□ -0.05
NUP88-203ENST00000572019 GABRB1P18505 474 aa14.77□□□□□ -0.05
NUP88-203ENST00000572019 ACTBP60709 375 aa14.77□□□□□ -0.05
NUP88-203ENST00000572019 ZIK1Q3SY52 487 aaPredicted RBP14.77□□□□□ -0.05
NUP88-203ENST00000572019 SYT6Q5T7P8 510 aaPredicted RBP14.77□□□□□ -0.05
NUP88-203ENST00000572019 ACSM6Q6P461 480 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms