RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 LOC100506127A0A0U1RQW1 187 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 SMIM30A4D0T7 59 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 NOTOA8MTQ0 251 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 LEUTXA8MZ59 168 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 J3QR06 171 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 F2RL2O00254 374 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 NDUFA7O95182 113 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 IGHV3-7P01780 117 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 JUNBP17275 347 aaPredicted RBP17.46■□□□□ 0.39
NME3-210ENST00000567271 VEGFCP49767 419 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 RAB13P51153 203 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 DYNLT3P51808 116 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 TMEM50BP56557 158 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 LY6EQ16553 131 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 TRAT1Q6PIZ9 186 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 CREB3L1Q96BA8 519 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 MMP28Q9H239 520 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 RNF167Q9H6Y7 350 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 LIN7BQ9HAP6 207 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 HSF4Q9ULV5 492 aa17.46■□□□□ 0.39
NME3-210ENST00000567271 LY6LH3BQJ8 138 aa17.45■□□□□ 0.38
NME3-210ENST00000567271 SDCBPO00560 298 aaPredicted RBP17.45■□□□□ 0.38
NME3-210ENST00000567271 SLC2A2P11168 524 aaPredicted RBP17.45■□□□□ 0.38
NME3-210ENST00000567271 LOXL3P58215 753 aa17.45■□□□□ 0.38
NME3-210ENST00000567271 OR56B1Q8NGI3 324 aa17.45■□□□□ 0.38
NME3-210ENST00000567271 CENPOQ9BU64 300 aa17.45■□□□□ 0.38
NME3-210ENST00000567271 RAB9BQ9NP90 201 aa17.45■□□□□ 0.38
NME3-210ENST00000567271 ABCB10Q9NRK6 738 aa17.45■□□□□ 0.38
NME3-210ENST00000567271 A0A0B4J203 849 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 SPINT2O43291 252 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 HBZP02008 142 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 SDC2P34741 201 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 CEACAM3P40198 252 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 EFNB2P52799 333 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 RAG2P55895 527 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 TPTE2P1Q5T6R2 138 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 ZNF554Q86TJ5 538 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 OR4F5Q8NH21 305 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 OR1L1Q8NH94 360 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 YIPF6Q96EC8 236 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 TAF9BQ9HBM6 251 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 GFOD1Q9NXC2 390 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 KCNIP1Q9NZI2 227 aa17.44■□□□□ 0.38
NME3-210ENST00000567271 NAPSAO96009 420 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 RAB6AP20340 208 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 MDKP21741 143 aaPredicted RBP17.43■□□□□ 0.38
NME3-210ENST00000567271 GNG10P50151 68 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 TMEM30BQ3MIR4 351 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 TIMM50Q3ZCQ8 353 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 DHRS7BQ6IAN0 325 aaPredicted RBP17.43■□□□□ 0.38
NME3-210ENST00000567271 FAM53AQ6NSI3 398 aaPredicted RBP17.43■□□□□ 0.38
NME3-210ENST00000567271 LIAT1Q6ZQX7 453 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 Q6ZTK2 550 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 PRR18Q8N4B5 295 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 C3orf56Q8N813 242 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 PTX4Q96A99 478 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 ARHGAP5-AS1Q96IT6 56 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 TCF19Q9Y242 345 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 MMP24Q9Y5R2 645 aa17.43■□□□□ 0.38
NME3-210ENST00000567271 IGHV3-43A0A0B4J1X8 118 aa17.42■□□□□ 0.38
NME3-210ENST00000567271 CLEC2LP0C7M8 214 aa17.42■□□□□ 0.38
NME3-210ENST00000567271 IGHV3-43DP0DP04 118 aa17.42■□□□□ 0.38
NME3-210ENST00000567271 PLAC9Q5JTB6 97 aa17.42■□□□□ 0.38
NME3-210ENST00000567271 C8orf31Q8N9H6 132 aa17.42■□□□□ 0.38
NME3-210ENST00000567271 PECRQ9BY49 303 aa17.42■□□□□ 0.38
NME3-210ENST00000567271 RIMS4Q9H426 269 aaPredicted RBP17.42■□□□□ 0.38
NME3-210ENST00000567271 BEX1Q9HBH7 125 aa17.42■□□□□ 0.38
NME3-210ENST00000567271 AK3Q9UIJ7 227 aa17.42■□□□□ 0.38
NME3-210ENST00000567271 AMMECR1Q9Y4X0 333 aaPredicted RBP17.42■□□□□ 0.38
NME3-210ENST00000567271 A0A1B0GUS0 222 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 A0A1W2PPE3 182 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 A6NDX4 124 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 OOSP1A8MZH6 123 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 MXD1Q05195 221 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 Q3ZCU0 254 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 SFXN4Q6P4A7 337 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 ZNF880Q6PDB4 577 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 CCBE1Q6UXH8 406 aaPredicted RBP17.41■□□□□ 0.38
NME3-210ENST00000567271 Q6ZPA2 131 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 Q6ZSV7 163 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 C5orf24Q7Z6I8 188 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 LINC00311Q8N616 119 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 CHMP1AQ9HD42 196 aaPredicted RBP17.41■□□□□ 0.38
NME3-210ENST00000567271 RAB18Q9NP72 206 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 DAPK2Q9UIK4 370 aa17.41■□□□□ 0.38
NME3-210ENST00000567271 TRBV6-6A0A0A6YYG2 114 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 POM121CA8CG34 1229 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 CHST1O43916 411 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 AIREO43918 545 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 TSPAN9O75954 239 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 MADCAM1Q13477 382 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 HMGN3Q15651 99 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 MOGAT2Q3SYC2 334 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 OR10X1Q8NGY0 326 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 HDHD3Q9BSH5 251 aaPredicted RBP17.4■□□□□ 0.38
NME3-210ENST00000567271 C16orf95Q9H693 158 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 GNG12Q9UBI6 72 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 PITPNC1Q9UKF7 332 aa17.4■□□□□ 0.38
NME3-210ENST00000567271 CLPSL1A2RUU4 121 aa17.39■□□□□ 0.37
NME3-210ENST00000567271 METTL21EPA6NDL7 271 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms