RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 VSIG4Q9Y279 399 aa14.53□□□□□ -0.08
NME3-204ENST00000563498 TENM2Q9NT68 2774 aa14.53□□□□□ -0.08
NME3-204ENST00000563498 SAC3D1A6NKF1 404 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 E9PI62 339 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 GEMIN2O14893 280 aaKnown RBP14.52□□□□□ -0.09
NME3-204ENST00000563498 FADS2O95864 444 aaKnown RBP14.52□□□□□ -0.09
NME3-204ENST00000563498 MT-ND4P03905 459 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 CSTBP04080 98 aaKnown RBP14.52□□□□□ -0.09
NME3-204ENST00000563498 ALPLP05186 524 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 VHLP40337 213 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 ASPHD1Q5U4P2 390 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 C1orf146Q5VVC0 180 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 TMEM65Q6PI78 240 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 ZNF497Q6ZNH5 498 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 ZNF491Q8N8L2 437 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 GNB4Q9HAV0 340 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 RAB9BQ9NP90 201 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 PAK1IP1Q9NWT1 392 aaPredicted RBP14.52□□□□□ -0.09
NME3-204ENST00000563498 ERVK13-1Q9NX77 482 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 TAS2R4Q9NYW5 299 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 ORC6Q9Y5N6 252 aa14.52□□□□□ -0.09
NME3-204ENST00000563498 DNAH7Q8WXX0 4024 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 IGHV3-43A0A0B4J1X8 118 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 SLC31A2O15432 143 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 ZNF780AO75290 641 aaPredicted RBP14.51□□□□□ -0.09
NME3-204ENST00000563498 IGLV1-40P01703 118 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 CD2P06729 351 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 IGHV3-43DP0DP04 118 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 GBX2P52951 348 aaPredicted RBP14.51□□□□□ -0.09
NME3-204ENST00000563498 STEAP3Q658P3 488 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 FAM53AQ6NSI3 398 aaPredicted RBP14.51□□□□□ -0.09
NME3-204ENST00000563498 UBALD1Q8TB05 177 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 CCDC107Q8WV48 283 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 KLK15Q9H2R5 256 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 TMEM138Q9NPI0 162 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 ING4Q9UNL4 249 aa14.51□□□□□ -0.09
NME3-204ENST00000563498 C12orf77C9JDV5 145 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 AIPO00170 330 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 LYL1P12980 280 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 GABRB1P18505 474 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 ZNF93P35789 620 aaPredicted RBP14.5□□□□□ -0.09
NME3-204ENST00000563498 SOX2P48431 317 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 ZNF134P52741 427 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 CT45A1Q5HYN5 189 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 ATAD3CQ5T2N8 411 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 STX19Q8N4C7 294 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 CT45A3Q8NHU0 189 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 GPR148Q8TDV2 347 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 NEK7Q8TDX7 302 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 RGP1Q92546 391 aaPredicted RBP14.5□□□□□ -0.09
NME3-204ENST00000563498 S100A13Q99584 98 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 ISYNA1Q9NPH2 558 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 GNG12Q9UBI6 72 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 SORL1Q92673 2214 aa14.5□□□□□ -0.09
NME3-204ENST00000563498 FAM90A10PA6NDY2 464 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 SPINT2O43291 252 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 LANCL1O43813 399 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 GNB1P62873 340 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 RAB40BQ12829 278 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 LSAMPQ13449 338 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 MMDQ15546 238 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 TMEM106AQ96A25 262 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 Q96MT0 163 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 OR51J1Q9H342 316 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 SPACA1Q9HBV2 294 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 SACSQ9NZJ4 4579 aa14.49□□□□□ -0.09
NME3-204ENST00000563498 OVOL1O14753 267 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 HLA-DRB1P01911 266 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 FRMD6-AS1P0C7T7 363 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 SLC2A2P11168 524 aaPredicted RBP14.48□□□□□ -0.09
NME3-204ENST00000563498 GTF2F2P13984 249 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 SERPINA2P20848 420 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 RASSF2P50749 326 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 PPP3R1P63098 170 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 CCDC58Q4VC31 144 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 C6orf183Q5T699 404 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 DDI2Q5TDH0 399 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 DCUN1D4Q92564 292 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 ZMAT4Q9H898 229 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 RCC2Q9P258 522 aaKnown RBP14.48□□□□□ -0.09
NME3-204ENST00000563498 AASSQ9UDR5 926 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 WSB1Q9Y6I7 421 aa14.48□□□□□ -0.09
NME3-204ENST00000563498 LCE6AA0A183 80 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 G3V318 75 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 EI24O14681 340 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 ATP6V0E1O15342 81 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 MYF6P23409 242 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 BDKRB2P30411 391 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 RAB9AP51151 201 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 ALDH3A2P51648 485 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 GTF2A1P52655 376 aaPredicted RBP14.47□□□□□ -0.09
NME3-204ENST00000563498 GPR176Q14439 515 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 ZIK1Q3SY52 487 aaPredicted RBP14.47□□□□□ -0.09
NME3-204ENST00000563498 SYT6Q5T7P8 510 aaPredicted RBP14.47□□□□□ -0.09
NME3-204ENST00000563498 RPL22L1Q6P5R6 122 aaKnown RBP14.47□□□□□ -0.09
NME3-204ENST00000563498 TRAT1Q6PIZ9 186 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 GAPTQ8N292 157 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 RBMXL1Q96E39 390 aaKnown RBP14.47□□□□□ -0.09
NME3-204ENST00000563498 CITED4Q96RK1 184 aa14.47□□□□□ -0.09
NME3-204ENST00000563498 PALMDQ9NP74 551 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms