RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 OLFML2AQ68BL7 652 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 ZNF880Q6PDB4 577 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 CCBE1Q6UXH8 406 aaPredicted RBP6.89□□□□□ -1.31
UBR1-204ENST00000563239 SLC16A12Q6ZSM3 486 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 TPRA1Q86W33 373 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 OR10A7Q8NGE5 316 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 OR1L1Q8NH94 360 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 ARL11Q969Q4 196 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 KCTD7Q96MP8 289 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 NEDD4LQ96PU5 975 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 PECRQ9BY49 303 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 DPAGT1Q9H3H5 408 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 LIN7BQ9HAP6 207 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 VPREB3Q9UKI3 123 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 RAB22AQ9UL26 194 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 HSF4Q9ULV5 492 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 PSG11Q9UQ72 335 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 KCNK7Q9Y2U2 307 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 IGHV3-43A0A0B4J1X8 118 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 A0A1W2PPE3 182 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 BUB1B-PAK6H3BSN5 160 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 H3BUI4 141 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 J3QR06 171 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 RAB27BO00194 218 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 CHST1O43916 411 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 HBZP02008 142 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 IGHV3-43DP0DP04 118 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 RAB6AP20340 208 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 HTR1DP28221 377 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 DYNLT3P51808 116 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 ZNF134P52741 427 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 ACTG1P63261 375 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 MXD1Q05195 221 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 DIAPH2-AS1Q14236 149 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 FAM189A2Q15884 450 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 HLA-DRB5Q30154 266 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 AWAT1Q58HT5 328 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 SFXN4Q6P4A7 337 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 GDPGP1Q6ZNW5 385 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 ZNF439Q8NDP4 499 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 OR52M1Q8NGK5 317 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 OR13F1Q8NGS4 319 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 OR5R1Q8NH85 324 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 OR9G1Q8NH87 305 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 ZNF596Q8TC21 504 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 GCDHQ92947 438 aaPredicted RBP6.88□□□□□ -1.31
UBR1-204ENST00000563239 PTX4Q96A99 478 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 ARHGAP5-AS1Q96IT6 56 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 HDHD3Q9BSH5 251 aaPredicted RBP6.88□□□□□ -1.31
UBR1-204ENST00000563239 URM1Q9BTM9 101 aaKnown RBP6.88□□□□□ -1.31
UBR1-204ENST00000563239 MMP28Q9H239 520 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 TAF9BQ9HBM6 251 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 GFOD1Q9NXC2 390 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 DPM3Q9P2X0 92 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 AK3Q9UIJ7 227 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 TRAPPC2LQ9UL33 140 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 HILPDAQ9Y5L2 63 aa6.88□□□□□ -1.31
UBR1-204ENST00000563239 TRBV6-6A0A0A6YYG2 114 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 A6NDX4 124 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 LEUTXA8MZ59 168 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 SDCBPO00560 298 aaPredicted RBP6.87□□□□□ -1.31
UBR1-204ENST00000563239 TOR1AO14656 332 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 SLC31A2O15432 143 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 AIREO43918 545 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 NDUFA7O95182 113 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 SNRPBP14678 240 aaKnown RBP6.87□□□□□ -1.31
UBR1-204ENST00000563239 MDKP21741 143 aaPredicted RBP6.87□□□□□ -1.31
UBR1-204ENST00000563239 PRRX1P54821 245 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 RPL15P61313 204 aaKnown RBP6.87□□□□□ -1.31
UBR1-204ENST00000563239 GNMTQ14749 295 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 HMGN3Q15651 99 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 LY6EQ16553 131 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 C6orf183Q5T699 404 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 TPTE2P1Q5T6R2 138 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 Q6ZSV7 163 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 Q6ZTK2 550 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 ZNF554Q86TJ5 538 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 LINC00311Q8N616 119 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 C8orf31Q8N9H6 132 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 OR56B1Q8NGI3 324 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 OR5H6Q8NGV6 325 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 NDNFQ8TB73 568 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 FUNDC2Q9BWH2 189 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 PLEKHJ1Q9NW61 149 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 DAPK2Q9UIK4 370 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 NOTCH1P46531 2555 aa6.87□□□□□ -1.31
UBR1-204ENST00000563239 PKD1L1Q8TDX9 2849 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 MFNGO00587 321 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 SPINT2O43291 252 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 TSPAN9O75954 239 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 TFAP2AP05549 437 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 CD24P25063 80 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 RPS19P39019 145 aaKnown RBP6.86□□□□□ -1.31
UBR1-204ENST00000563239 RANBP1P43487 201 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 ALDH3B2P48448 385 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 GNG10P50151 68 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 RAG2P55895 527 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 LSM3P62310 102 aaKnown RBP6.86□□□□□ -1.31
UBR1-204ENST00000563239 FOXL1Q12952 345 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 CT45A1Q5HYN5 189 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms