RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 FAM71E2Q8N5Q1 922 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 ZNF439Q8NDP4 499 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 TMEM106AQ96A25 262 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 RBMXL1Q96E39 390 aaKnown RBP12.47□□□□□ -0.41
SCFD1-224ENST00000557713 PRR25Q96S07 402 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 HSPB9Q9BQS6 159 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 TMEM138Q9NPI0 162 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 RPL36Q9Y3U8 105 aaKnown RBP12.47□□□□□ -0.41
SCFD1-224ENST00000557713 RRP9O43818 475 aaKnown RBP12.46□□□□□ -0.41
SCFD1-224ENST00000557713 IGF1P05019 195 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 SERPINA2P20848 420 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 PSMB8P28062 276 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 BDKRB2P30411 391 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 ZNF134P52741 427 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 ZNF137PP52743 207 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 FHL3Q13643 280 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 ATAD3CQ5T2N8 411 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 DDI2Q5TDH0 399 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 SLC25A48Q6ZT89 311 aaKnown RBP12.46□□□□□ -0.41
SCFD1-224ENST00000557713 C4orf3Q8WVX3 66 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 APH1BQ8WW43 257 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 ORAI1Q96D31 301 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 S100A13Q99584 98 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 FGF20Q9NP95 211 aaPredicted RBP12.46□□□□□ -0.41
SCFD1-224ENST00000557713 PAK1IP1Q9NWT1 392 aaPredicted RBP12.46□□□□□ -0.41
SCFD1-224ENST00000557713 ZNF580Q9UK33 172 aa12.46□□□□□ -0.41
SCFD1-224ENST00000557713 SIRT4Q9Y6E7 314 aaPredicted RBP12.46□□□□□ -0.41
SCFD1-224ENST00000557713 LOC100130705A0A1B0GUX0 176 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 A0A1W2PP11 408 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 SEC14L6B5MCN3 397 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 C12orf77C9JDV5 145 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 TXNL1O43396 289 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 ZNF780AO75290 641 aaPredicted RBP12.45□□□□□ -0.42
SCFD1-224ENST00000557713 SOX6P35712 828 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 ECI1P42126 302 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 CT45A1Q5HYN5 189 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 CT45A3Q8NHU0 189 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 SLC29A1Q99808 456 aa12.45□□□□□ -0.42
SCFD1-224ENST00000557713 AIPO00170 330 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 DYNC1I1O14576 645 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 OGG1O15527 345 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 GPX5O75715 221 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 GTF2F2P13984 249 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 IGFBP3P17936 291 aaPredicted RBP12.44□□□□□ -0.42
SCFD1-224ENST00000557713 VDAC1P21796 283 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 ETV1P50549 477 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 PPP3R1P63098 170 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 KIAA0141Q14154 515 aaPredicted RBP12.44□□□□□ -0.42
SCFD1-224ENST00000557713 SYT6Q5T7P8 510 aaPredicted RBP12.44□□□□□ -0.42
SCFD1-224ENST00000557713 ZFP1Q6P2D0 407 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 GAPTQ8N292 157 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 MYOZ3Q8TDC0 251 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 NEK7Q8TDX7 302 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 KCTD7Q96MP8 289 aa12.44□□□□□ -0.42
SCFD1-224ENST00000557713 RCC2Q9P258 522 aaKnown RBP12.44□□□□□ -0.42
SCFD1-224ENST00000557713 SPINT2O43291 252 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 PPIFP30405 207 aaKnown RBP12.43□□□□□ -0.42
SCFD1-224ENST00000557713 SMN1Q16637 294 aaKnown RBP12.43□□□□□ -0.42
SCFD1-224ENST00000557713 TMEM30BQ3MIR4 351 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 ZNF260Q3ZCT1 412 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 SLC22A6Q4U2R8 563 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 OR2G6Q5TZ20 316 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 STEAP3Q658P3 488 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 STX19Q8N4C7 294 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 OR11H1Q8NG94 326 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 ZNF184Q99676 751 aaPredicted RBP12.43□□□□□ -0.42
SCFD1-224ENST00000557713 ASCL2Q99929 193 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 CHCHD6Q9BRQ6 235 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 C9orf16Q9BUW7 83 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 SPACA1Q9HBV2 294 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 BABAM2Q9NXR7 383 aa12.43□□□□□ -0.42
SCFD1-224ENST00000557713 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
SCFD1-224ENST00000557713 TRBV5-5A0A0J9YX44 114 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 I3L521 148 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 WBP4O75554 376 aaKnown RBP12.42□□□□□ -0.42
SCFD1-224ENST00000557713 HBZP02008 142 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 DCKP27707 260 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 RIPK1Q13546 671 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 GPR176Q14439 515 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 TMPRSS11AQ6ZMR5 421 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 ZNF491Q8N8L2 437 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 OR10V1Q8NGI7 309 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 OR13C5Q8NGS8 318 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 OR4K15Q8NH41 348 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 OR1L1Q8NH94 360 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 MRPS24Q96EL2 167 aaKnown RBP12.42□□□□□ -0.42
SCFD1-224ENST00000557713 UBE2E2Q96LR5 201 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 KLK15Q9H2R5 256 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 RAB9BQ9NP90 201 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 ETAA1Q9NY74 926 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 GNG12Q9UBI6 72 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 ZNF107Q9UII5 783 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-224ENST00000557713 TRAPPC2LQ9UL33 140 aa12.42□□□□□ -0.42
SCFD1-224ENST00000557713 ZNF256Q9Y2P7 627 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-224ENST00000557713 MAGEA13PA6NCF6 341 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 C3orf84H3BNL1 204 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 LANCL1O43813 399 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 LALBAP00709 142 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 IGLV1-40P01703 118 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms