RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 SHISA3A0PJX4 238 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 F2RL2O00254 374 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 TFAP2AP05549 437 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 CD36P16671 472 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 JUNBP17275 347 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-209ENST00000557342 MDKP21741 143 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-209ENST00000557342 BRS3P32247 399 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 CLDN12P56749 244 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 RELBQ01201 579 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 Q3ZCU0 254 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 C6orf201Q7Z4U5 140 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 OR56B1Q8NGI3 324 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 PIFOQ8TCI5 191 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 KCTD7Q96MP8 289 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 SULT4A1Q9BR01 284 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 NICN1Q9BSH3 213 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 FAAP24Q9BTP7 215 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 ZNF747Q9BV97 191 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 RIMS4Q9H426 269 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-209ENST00000557342 MBNL3Q9NUK0 354 aaKnown RBP10.08□□□□□ -0.8
SLIRP-209ENST00000557342 RAB22AQ9UL26 194 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 HSF4Q9ULV5 492 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 PSG11Q9UQ72 335 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 TCF19Q9Y242 345 aa10.08□□□□□ -0.8
SLIRP-209ENST00000557342 A0A0A6YYD4 124 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 TMEM272A0A1B0GTI8 110 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 CLPSL1A2RUU4 121 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 NOTOA8MTQ0 251 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 C12orf77C9JDV5 145 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 LY6LH3BQJ8 138 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 LDLRAD4O15165 306 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 TSPAN9O75954 239 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 RAB6AP20340 208 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 MNDAP41218 407 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 RPL5P46777 297 aaKnown RBP10.07□□□□□ -0.8
SLIRP-209ENST00000557342 ALDH3B2P48448 385 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 VEGFCP49767 419 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 GNG10P50151 68 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 OR10A3P58181 314 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 TIMM50Q3ZCQ8 353 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 TPTE2P1Q5T6R2 138 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 OLFML2AQ68BL7 652 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 C8orf31Q8N9H6 132 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 OR10X1Q8NGY0 326 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 MRPL30Q8TCC3 161 aaKnown RBP10.07□□□□□ -0.8
SLIRP-209ENST00000557342 TAF15Q92804 592 aaKnown RBP eCLIP10.07□□□□□ -0.8
SLIRP-209ENST00000557342 LEAP2Q969E1 77 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 RPEQ96AT9 228 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 CHCHD6Q9BRQ6 235 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 OR51E2Q9H255 320 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 C16orf95Q9H693 158 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 RANBP3Q9H6Z4 567 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-209ENST00000557342 LIN7BQ9HAP6 207 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 TAF9BQ9HBM6 251 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 GFOD1Q9NXC2 390 aa10.07□□□□□ -0.8
SLIRP-209ENST00000557342 A6NDX4 124 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 SOCS1O15524 211 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 HBZP02008 142 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 RCC1P18754 421 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-209ENST00000557342 GADD45AP24522 165 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 RAB13P51153 203 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 LOXL3P58215 753 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 MADCAM1Q13477 382 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 SHISA2Q6UWI4 295 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 Q6ZSV7 163 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 Q6ZTK2 550 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 PRR18Q8N4B5 295 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 LINC00311Q8N616 119 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 TOMM40LQ969M1 308 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 PTX4Q96A99 478 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 CHMP1AQ9HD42 196 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-209ENST00000557342 ABRACLQ9P1F3 81 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 GNG12Q9UBI6 72 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 MGAT4AQ9UM21 535 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 RNF114Q9Y508 228 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 FBN3Q75N90 2809 aa10.06□□□□□ -0.8
SLIRP-209ENST00000557342 TRBV6-6A0A0A6YYG2 114 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 LOC100506127A0A0U1RQW1 187 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 METTL21EPA6NDL7 271 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 FOXI3A8MTJ6 420 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-209ENST00000557342 IGHV3-7P01780 117 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 LPLP06858 475 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 IL3RAP26951 378 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 RAB7AP51149 207 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 HTD2P86397 168 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 UTF1Q5T230 341 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 MOB1BQ7L9L4 216 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 C16orf82Q7Z2V1 217 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 OR1L1Q8NH94 360 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 LINC01006Q8NI28 216 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 UBALD1Q8TB05 177 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 GALMQ96C23 342 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 OCSTAMPQ9BR26 566 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 BATF3Q9NR55 127 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
SLIRP-209ENST00000557342 IGHV3-43A0A0B4J1X8 118 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 RGS11O94810 467 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 NAPSAO96009 420 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms