RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 SOX2P48431 317 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 CFHR3Q02985 330 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 ZNF529Q6P280 563 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 FAM71E2Q8N5Q1 922 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 MUC7Q8TAX7 377 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 CCDC107Q8WV48 283 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 ST6GALNAC6Q969X2 333 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 UBE2E2Q96LR5 201 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 HSPB9Q9BQS6 159 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 SPACA1Q9HBV2 294 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 TMEM138Q9NPI0 162 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 ERVK13-1Q9NX77 482 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 GNG12Q9UBI6 72 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 IGHV3-43A0A0B4J1X8 118 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 GEMIN2O14893 280 aaKnown RBP12.09□□□□□ -0.47
NEDD1-207ENST00000555114 ATP5HO75947 161 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 IGHV3-43DP0DP04 118 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 ZNF616Q08AN1 781 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 RAB40BQ12829 278 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 GPR176Q14439 515 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 ZIK1Q3SY52 487 aaPredicted RBP12.09□□□□□ -0.47
NEDD1-207ENST00000555114 C6orf183Q5T699 404 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 DDI2Q5TDH0 399 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 SLC25A48Q6ZT89 311 aaKnown RBP12.09□□□□□ -0.47
NEDD1-207ENST00000555114 ZNF429Q86V71 674 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 OR1N2Q8NGR9 330 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 VSIG4Q9Y279 399 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 GMPPBQ9Y5P6 360 aa12.09□□□□□ -0.47
NEDD1-207ENST00000555114 E9PI62 339 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 EI24O14681 340 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 GTF2F2P13984 249 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 ALDH3A2P51648 485 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 ZNF137PP52743 207 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 MMDQ15546 238 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 ZNF497Q6ZNH5 498 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 UBALD1Q8TB05 177 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 TMEM106AQ96A25 262 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 PALMDQ9NP74 551 aa12.08□□□□□ -0.48
NEDD1-207ENST00000555114 RPL36Q9Y3U8 105 aaKnown RBP12.08□□□□□ -0.48
NEDD1-207ENST00000555114 ZNF736B4DX44 427 aaPredicted RBP12.07□□□□□ -0.48
NEDD1-207ENST00000555114 MCRIP1C9JLW8 97 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 MT-ND4P03905 459 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 MYF6P23409 242 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 BDKRB2P30411 391 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 F2RL1P55085 397 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 RUNX1Q01196 453 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 CCDC58Q4VC31 144 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 CASC10Q5T4H9 136 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 STEAP3Q658P3 488 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 RPL22L1Q6P5R6 122 aaKnown RBP12.07□□□□□ -0.48
NEDD1-207ENST00000555114 MYOZ3Q8TDC0 251 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 RCHY1Q96PM5 261 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 ZMAT4Q9H898 229 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 ISYNA1Q9NPH2 558 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 ZNF581Q9P0T4 197 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 CKLFQ9UBR5 152 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 ERGIC3Q9Y282 383 aa12.07□□□□□ -0.48
NEDD1-207ENST00000555114 C12orf77C9JDV5 145 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 LANCL1O43813 399 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 SLC2A2P11168 524 aaPredicted RBP12.06□□□□□ -0.48
NEDD1-207ENST00000555114 LSAMPQ13449 338 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 RIPK1Q13546 671 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 SLC22A6Q4U2R8 563 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 SYT6Q5T7P8 510 aaPredicted RBP12.06□□□□□ -0.48
NEDD1-207ENST00000555114 PRR18Q8N4B5 295 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 ZNF251Q9BRH9 671 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 GHITMQ9H3K2 345 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 AMBNQ9NP70 447 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 ETAA1Q9NY74 926 aa12.06□□□□□ -0.48
NEDD1-207ENST00000555114 I3L521 148 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 OVOL1O14753 267 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 SLC31A2O15432 143 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 SAP30O75446 220 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 CA11O75493 328 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 GABRB1P18505 474 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 GTF2A1P52655 376 aaPredicted RBP12.05□□□□□ -0.48
NEDD1-207ENST00000555114 CT45A1Q5HYN5 189 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 TMPRSS11AQ6ZMR5 421 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 ZNF439Q8NDP4 499 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 OR10V1Q8NGI7 309 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 OR52I1Q8NGK6 324 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 CT45A3Q8NHU0 189 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 PYDC1Q8WXC3 89 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 RGP1Q92546 391 aaPredicted RBP12.05□□□□□ -0.48
NEDD1-207ENST00000555114 MRPS24Q96EL2 167 aaKnown RBP12.05□□□□□ -0.48
NEDD1-207ENST00000555114 OR51J1Q9H342 316 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 GNB4Q9HAV0 340 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 PARP11Q9NR21 331 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 KIAA1456Q9P272 454 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 AASSQ9UDR5 926 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
NEDD1-207ENST00000555114 TRAV41A0A0B4J266 112 aa12.04□□□□□ -0.48
NEDD1-207ENST00000555114 HLA-DRB1P01911 266 aa12.04□□□□□ -0.48
NEDD1-207ENST00000555114 HBZP02008 142 aa12.04□□□□□ -0.48
NEDD1-207ENST00000555114 LYL1P12980 280 aa12.04□□□□□ -0.48
NEDD1-207ENST00000555114 PPIFP30405 207 aaKnown RBP12.04□□□□□ -0.48
NEDD1-207ENST00000555114 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms