RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 IGHV3-43DP0DP04 118 aa18.85■□□□□ 0.61
FOXA1-204ENST00000554607 ZNF137PP52743 207 aa18.85■□□□□ 0.61
FOXA1-204ENST00000554607 GBX2P52951 348 aaPredicted RBP18.85■□□□□ 0.61
FOXA1-204ENST00000554607 MPV17LQ2QL34 196 aa18.85■□□□□ 0.61
FOXA1-204ENST00000554607 C1orf146Q5VVC0 180 aa18.85■□□□□ 0.61
FOXA1-204ENST00000554607 SLC25A48Q6ZT89 311 aaKnown RBP18.85■□□□□ 0.61
FOXA1-204ENST00000554607 SBSPONQ8IVN8 264 aa18.85■□□□□ 0.61
FOXA1-204ENST00000554607 CCDC107Q8WV48 283 aa18.85■□□□□ 0.61
FOXA1-204ENST00000554607 S100A13Q99584 98 aa18.85■□□□□ 0.61
FOXA1-204ENST00000554607 ZNF581Q9P0T4 197 aa18.85■□□□□ 0.61
FOXA1-204ENST00000554607 TENM2Q9NT68 2774 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 SAC3D1A6NKF1 404 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 I3L521 148 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 GEMIN2O14893 280 aaKnown RBP18.84■□□□□ 0.61
FOXA1-204ENST00000554607 FADS2O95864 444 aaKnown RBP18.84■□□□□ 0.61
FOXA1-204ENST00000554607 CD2P06729 351 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 LYL1P12980 280 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 TMEM30BQ3MIR4 351 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 ATAD3CQ5T2N8 411 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 STX19Q8N4C7 294 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 ZNF491Q8N8L2 437 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 UBALD1Q8TB05 177 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 NEK7Q8TDX7 302 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 JAM3Q9BX67 310 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 TAS2R4Q9NYW5 299 aa18.84■□□□□ 0.61
FOXA1-204ENST00000554607 E9PI62 339 aa18.83■□□□□ 0.6
FOXA1-204ENST00000554607 ZNF780AO75290 641 aaPredicted RBP18.83■□□□□ 0.6
FOXA1-204ENST00000554607 MT-ND4P03905 459 aa18.83■□□□□ 0.6
FOXA1-204ENST00000554607 ZNF497Q6ZNH5 498 aa18.83■□□□□ 0.6
FOXA1-204ENST00000554607 ZMAT4Q9H898 229 aa18.83■□□□□ 0.6
FOXA1-204ENST00000554607 GNB4Q9HAV0 340 aa18.83■□□□□ 0.6
FOXA1-204ENST00000554607 PALMDQ9NP74 551 aa18.83■□□□□ 0.6
FOXA1-204ENST00000554607 AIPO00170 330 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 SPINT2O43291 252 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 PPIFP30405 207 aaKnown RBP18.82■□□□□ 0.6
FOXA1-204ENST00000554607 SOX2P48431 317 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 KIAA0141Q14154 515 aaPredicted RBP18.82■□□□□ 0.6
FOXA1-204ENST00000554607 STEAP3Q658P3 488 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 FAM53AQ6NSI3 398 aaPredicted RBP18.82■□□□□ 0.6
FOXA1-204ENST00000554607 GPR148Q8TDV2 347 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 KLK15Q9H2R5 256 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 TMEM138Q9NPI0 162 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 ERVK13-1Q9NX77 482 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 GNG12Q9UBI6 72 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 SACSQ9NZJ4 4579 aa18.82■□□□□ 0.6
FOXA1-204ENST00000554607 OVOL1O14753 267 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 SLC31A2O15432 143 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 ALPLP05186 524 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 SERPINA2P20848 420 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 ZNF93P35789 620 aaPredicted RBP18.81■□□□□ 0.6
FOXA1-204ENST00000554607 VHLP40337 213 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 RASSF2P50749 326 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 PPP3R1P63098 170 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 DOC2BQ14184 412 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 ASPHD1Q5U4P2 390 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 ZNF439Q8NDP4 499 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 SPACA1Q9HBV2 294 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 ISYNA1Q9NPH2 558 aa18.81■□□□□ 0.6
FOXA1-204ENST00000554607 LANCL1O43813 399 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 IGLV1-40P01703 118 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 SLC2A2P11168 524 aaPredicted RBP18.8■□□□□ 0.6
FOXA1-204ENST00000554607 ZNF134P52741 427 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 MMDQ15546 238 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 CT45A1Q5HYN5 189 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 C6orf183Q5T699 404 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 CT45A3Q8NHU0 189 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 DCUN1D4Q92564 292 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 Q96MT0 163 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 TRAPPC2LQ9UL33 140 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 WSB1Q9Y6I7 421 aa18.8■□□□□ 0.6
FOXA1-204ENST00000554607 C12orf77C9JDV5 145 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 FRMD6-AS1P0C7T7 363 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 GTF2F2P13984 249 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 MYF6P23409 242 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 RAB9AP51151 201 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 GNB1P62873 340 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 RAB40BQ12829 278 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 LSAMPQ13449 338 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 ZIK1Q3SY52 487 aaPredicted RBP18.79■□□□□ 0.6
FOXA1-204ENST00000554607 DDI2Q5TDH0 399 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 OVCH2Q7RTZ1 564 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 OR5B12Q96R08 314 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 OR51J1Q9H342 316 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 GHITMQ9H3K2 345 aa18.79■□□□□ 0.6
FOXA1-204ENST00000554607 FAM90A10PA6NDY2 464 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 MCRIP1C9JLW8 97 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 G3V318 75 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 SAP30O75446 220 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 GPR176Q14439 515 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 SYT6Q5T7P8 510 aaPredicted RBP18.78■□□□□ 0.6
FOXA1-204ENST00000554607 TRAT1Q6PIZ9 186 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 OR10V1Q8NGI7 309 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 RGP1Q92546 391 aaPredicted RBP18.78■□□□□ 0.6
FOXA1-204ENST00000554607 TMEM106AQ96A25 262 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 AASSQ9UDR5 926 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 GMPPBQ9Y5P6 360 aa18.78■□□□□ 0.6
FOXA1-204ENST00000554607 TRAV41A0A0B4J266 112 aa18.77■□□□□ 0.6
FOXA1-204ENST00000554607 LCE6AA0A183 80 aa18.77■□□□□ 0.6
FOXA1-204ENST00000554607 HLA-DRB1P01911 266 aa18.77■□□□□ 0.6
FOXA1-204ENST00000554607 GP9P14770 177 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms