RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 OR56B1Q8NGI3 324 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 OR5R1Q8NH85 324 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 OR9G1Q8NH87 305 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 ARHGAP5-AS1Q96IT6 56 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 FOXI3A8MTJ6 420 aaPredicted RBP18.45■□□□□ 0.54
TDP1-206ENST00000553569 SPINT2O43291 252 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 IGLV1-47P01700 117 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 CRYBA1P05813 215 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 HKR1P10072 659 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 PRRX1P54821 245 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 TRAT1Q6PIZ9 186 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 GDPGP1Q6ZNW5 385 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 OR1L1Q8NH94 360 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 SPATA3Q8NHX4 192 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 KCNIP1Q9NZI2 227 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 AK3Q9UIJ7 227 aa18.45■□□□□ 0.54
TDP1-206ENST00000553569 TMEM89A2RUT3 159 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 HBZP02008 142 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 SNRPBP14678 240 aaKnown RBP18.44■□□□□ 0.54
TDP1-206ENST00000553569 RAB6AP20340 208 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 TMEM50BP56557 158 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 MOGAT2Q3SYC2 334 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 FAM53AQ6NSI3 398 aaPredicted RBP18.44■□□□□ 0.54
TDP1-206ENST00000553569 Q6ZTK2 550 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 SETD6Q8TBK2 473 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 HDHD3Q9BSH5 251 aaPredicted RBP18.44■□□□□ 0.54
TDP1-206ENST00000553569 PECRQ9BY49 303 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 MMP28Q9H239 520 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 TAF9BQ9HBM6 251 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 ABCB10Q9NRK6 738 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 MBNL3Q9NUK0 354 aaKnown RBP18.44■□□□□ 0.54
TDP1-206ENST00000553569 DPM3Q9P2X0 92 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 HSF4Q9ULV5 492 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 PSG11Q9UQ72 335 aa18.44■□□□□ 0.54
TDP1-206ENST00000553569 A0A1W2PPE3 182 aa18.43■□□□□ 0.54
TDP1-206ENST00000553569 J3QR06 171 aa18.43■□□□□ 0.54
TDP1-206ENST00000553569 PLAC9Q5JTB6 97 aa18.43■□□□□ 0.54
TDP1-206ENST00000553569 C5orf24Q7Z6I8 188 aa18.43■□□□□ 0.54
TDP1-206ENST00000553569 LGALS14Q8TCE9 139 aa18.43■□□□□ 0.54
TDP1-206ENST00000553569 FUNDC2Q9BWH2 189 aa18.43■□□□□ 0.54
TDP1-206ENST00000553569 MRPS26Q9BYN8 205 aaKnown RBP18.43■□□□□ 0.54
TDP1-206ENST00000553569 RAB9BQ9NP90 201 aa18.43■□□□□ 0.54
TDP1-206ENST00000553569 GFOD1Q9NXC2 390 aa18.43■□□□□ 0.54
TDP1-206ENST00000553569 GNG12Q9UBI6 72 aa18.43■□□□□ 0.54
TDP1-206ENST00000553569 LEUTXA8MZ59 168 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 BUB1B-PAK6H3BSN5 160 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 F2RL2O00254 374 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 RAB13P51153 203 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 AANATQ16613 207 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 IDNKQ5T6J7 187 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 OLFML2AQ68BL7 652 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 C12orf54Q6X4T0 127 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 OR10V1Q8NGI7 309 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 OR52M1Q8NGK5 317 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 OR13F1Q8NGS4 319 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 RAB3CQ96E17 227 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 ATG5Q9H1Y0 275 aa18.42■□□□□ 0.54
TDP1-206ENST00000553569 AMMECR1Q9Y4X0 333 aaPredicted RBP18.42■□□□□ 0.54
TDP1-206ENST00000553569 A0A075B6Q4 140 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 METTL21EPA6NDL7 271 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 VGLL3A8MV65 326 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 NAPSAO96009 420 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 CEACAM3P40198 252 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 LOXL3P58215 753 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 TPTE2P1Q5T6R2 138 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 DHRS7BQ6IAN0 325 aaPredicted RBP18.41■□□□□ 0.54
TDP1-206ENST00000553569 Q6ZPA2 131 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 SLC16A12Q6ZSM3 486 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 OR10R2Q8NGX6 335 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 OR10X1Q8NGY0 326 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 CREB3L1Q96BA8 519 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 C1RLQ9NZP8 487 aa18.41■□□□□ 0.54
TDP1-206ENST00000553569 AWAT1Q58HT5 328 aa18.4■□□□□ 0.54
TDP1-206ENST00000553569 PIFOQ8TCI5 191 aa18.4■□□□□ 0.54
TDP1-206ENST00000553569 TOMM40LQ969M1 308 aa18.4■□□□□ 0.54
TDP1-206ENST00000553569 PTX4Q96A99 478 aa18.4■□□□□ 0.54
TDP1-206ENST00000553569 CMSS1Q9BQ75 279 aaKnown RBP18.4■□□□□ 0.54
TDP1-206ENST00000553569 C12orf4Q9NQ89 552 aa18.4■□□□□ 0.54
TDP1-206ENST00000553569 RAB27BO00194 218 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 GNB3P16520 340 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 RAG2P55895 527 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 RPL15P61313 204 aaKnown RBP18.39■□□□□ 0.53
TDP1-206ENST00000553569 RELBQ01201 579 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 FOXL1Q12952 345 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 GNMTQ14749 295 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 HMGN3Q15651 99 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 TMEM30BQ3MIR4 351 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 MOB1BQ7L9L4 216 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 ZNF554Q86TJ5 538 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 RPEQ96AT9 228 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 RIMS4Q9H426 269 aaPredicted RBP18.39■□□□□ 0.53
TDP1-206ENST00000553569 OR2S2Q9NQN1 319 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 ABRACLQ9P1F3 81 aa18.39■□□□□ 0.53
TDP1-206ENST00000553569 LY6LH3BQJ8 138 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 CD3GP09693 182 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 SERPINB10P48595 397 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 COMPP49747 757 aaPredicted RBP18.38■□□□□ 0.53
TDP1-206ENST00000553569 NCS1P62166 190 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 MRPS15P82914 257 aaKnown RBP18.38■□□□□ 0.53
TDP1-206ENST00000553569 MADCAM1Q13477 382 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms