RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 RSU1Q15404 277 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 ZSCAN26Q16670 478 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 PIGYQ3MUY2 71 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 MEDAGQ5VYS4 303 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 TMEM65Q6PI78 240 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 OVCH2Q7RTZ1 564 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 DCUN1D4Q92564 292 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 RNFT2Q96EX2 444 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 MRPL48Q96GC5 212 aaKnown RBP7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 C4orf36Q96KX1 117 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 GNB4Q9HAV0 340 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 IL36GQ9NZH8 169 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 ST3GAL6Q9Y274 331 aa7.64□□□□□ -1.19
TRAFD1-207ENST00000550051 ELOA3CA0A087WX78 387 aaPredicted RBP7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 OVOL1O14753 267 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 SPNP16150 400 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 RAB3AP20336 220 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 RAB9AP51151 201 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF134P52741 427 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 MRPL28Q13084 256 aaKnown RBP7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 TMEM30BQ3MIR4 351 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 CT45A1Q5HYN5 189 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 FAM53AQ6NSI3 398 aaPredicted RBP7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF497Q6ZNH5 498 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 AMIGO2Q86SJ2 522 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 LINC00596Q86U02 117 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 SATL1Q86VE3 508 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 SYS1Q8N2H4 156 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF439Q8NDP4 499 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 OR52N1Q8NH53 320 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 OR5AK2Q8NH90 309 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 CT45A3Q8NHU0 189 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 TNFAIP8L1Q8WVP5 186 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 GPER1Q99527 375 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 TM2D3Q9BRN9 247 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 OR51J1Q9H342 316 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 PALMDQ9NP74 551 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 TPSG1Q9NRR2 321 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF581Q9P0T4 197 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF107Q9UII5 783 aaPredicted RBP7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 AP4S1Q9Y587 144 aa7.63□□□□□ -1.19
TRAFD1-207ENST00000550051 LYSTQ99698 3801 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 MAGEA13PA6NCF6 341 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 A8MZ25 164 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 LANCL1O43813 399 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 OR7C1O76099 320 aaPredicted RBP7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 HTR3BO95264 441 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 FCGR1AP12314 374 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 GP9P14770 177 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 RBM11P57052 281 aaKnown RBP7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 GNB1P62873 340 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 MPV17LQ2QL34 196 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 ACSM6Q6P461 480 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 LHFPL3Q86UP9 236 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 MINDY2Q8NBR6 621 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 OR51A2Q8NGJ7 313 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 OR10K1Q8NGX5 313 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 CCDC107Q8WV48 283 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 DLX4Q92988 240 aaPredicted RBP7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 JAM3Q9BX67 310 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 METTL9Q9H1A3 318 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 ISG20L2Q9H9L3 353 aaKnown RBP7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 EDA2RQ9HAV5 297 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 RAB9BQ9NP90 201 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 ISYNA1Q9NPH2 558 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 PAK1IP1Q9NWT1 392 aaPredicted RBP7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 IMPAD1Q9NX62 359 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 GAR1Q9NY12 217 aaKnown RBP7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 NKX1-2Q9UD57 310 aaPredicted RBP7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 DHDHQ9UQ10 334 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 GMPPBQ9Y5P6 360 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 WSB1Q9Y6I7 421 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 CSMD3Q7Z407 3707 aa7.62□□□□□ -1.19
TRAFD1-207ENST00000550051 SNTNA6NMZ2 147 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 E9PI62 339 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 G3V318 75 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 GEMIN2O14893 280 aaKnown RBP7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 LDLRAD4O15165 306 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 SLC31A2O15432 143 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 SAP30O75446 220 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 CDRT1O95170 752 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 HLA-DRB1P01911 266 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 CSTBP04080 98 aaKnown RBP7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 VEGFCP49767 419 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 LSAMPQ13449 338 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 LIN54Q6MZP7 749 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 Q8N1Y9 231 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 GAPTQ8N292 157 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 OR6Q1Q8NGQ2 317 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 LGALS12Q96DT0 336 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 CENPNQ96H22 339 aaPredicted RBP7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 PDCD1LG2Q9BQ51 273 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 ALG8Q9BVK2 526 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 GHITMQ9H3K2 345 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 TMEM138Q9NPI0 162 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 C19orf73Q9NVV2 129 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 OAZ3Q9UMX2 235 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 ING4Q9UNL4 249 aa7.61□□□□□ -1.19
TRAFD1-207ENST00000550051 RYR2Q92736 4967 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 DNAH1Q9P2D7 4330 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms