RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 SOCS1O15524 211 aa8.79□□□□□ -1
GCN1-202ENST00000547263 RCC1P18754 421 aaPredicted RBP8.79□□□□□ -1
GCN1-202ENST00000547263 RAB3BP20337 219 aa8.79□□□□□ -1
GCN1-202ENST00000547263 RAB6AP20340 208 aa8.79□□□□□ -1
GCN1-202ENST00000547263 MDKP21741 143 aaPredicted RBP8.79□□□□□ -1
GCN1-202ENST00000547263 MYL9P24844 172 aa8.79□□□□□ -1
GCN1-202ENST00000547263 RAG2P55895 527 aa8.79□□□□□ -1
GCN1-202ENST00000547263 PLA2G7Q13093 441 aa8.79□□□□□ -1
GCN1-202ENST00000547263 P2RY14Q15391 338 aa8.79□□□□□ -1
GCN1-202ENST00000547263 HMGN3Q15651 99 aa8.79□□□□□ -1
GCN1-202ENST00000547263 SSX2Q16385 188 aa8.79□□□□□ -1
GCN1-202ENST00000547263 C6orf183Q5T699 404 aa8.79□□□□□ -1
GCN1-202ENST00000547263 TPTE2P1Q5T6R2 138 aa8.79□□□□□ -1
GCN1-202ENST00000547263 STEAP3Q658P3 488 aa8.79□□□□□ -1
GCN1-202ENST00000547263 C6orf201Q7Z4U5 140 aa8.79□□□□□ -1
GCN1-202ENST00000547263 OR4F5Q8NH21 305 aa8.79□□□□□ -1
GCN1-202ENST00000547263 ARL11Q969Q4 196 aa8.79□□□□□ -1
GCN1-202ENST00000547263 YIPF6Q96EC8 236 aa8.79□□□□□ -1
GCN1-202ENST00000547263 URM1Q9BTM9 101 aaKnown RBP8.79□□□□□ -1
GCN1-202ENST00000547263 OR51E2Q9H255 320 aa8.79□□□□□ -1
GCN1-202ENST00000547263 ING3Q9NXR8 418 aa8.79□□□□□ -1
GCN1-202ENST00000547263 A0A1W2PPI3 338 aa8.78□□□□□ -1
GCN1-202ENST00000547263 NOTOA8MTQ0 251 aa8.78□□□□□ -1
GCN1-202ENST00000547263 HBZP02008 142 aa8.78□□□□□ -1
GCN1-202ENST00000547263 BLVRBP30043 206 aaPredicted RBP8.78□□□□□ -1
GCN1-202ENST00000547263 KIR2DS4P43632 304 aa8.78□□□□□ -1
GCN1-202ENST00000547263 PRRX1P54821 245 aa8.78□□□□□ -1
GCN1-202ENST00000547263 CLDN12P56749 244 aa8.78□□□□□ -1
GCN1-202ENST00000547263 SCAND1P57086 179 aa8.78□□□□□ -1
GCN1-202ENST00000547263 HTD2P86397 168 aa8.78□□□□□ -1
GCN1-202ENST00000547263 ZNF816Q0VGE8 651 aaPredicted RBP8.78□□□□□ -1
GCN1-202ENST00000547263 DYNC1I2Q13409 638 aaKnown RBP8.78□□□□□ -1
GCN1-202ENST00000547263 FBLN7Q53RD9 439 aa8.78□□□□□ -1
GCN1-202ENST00000547263 PLAC9Q5JTB6 97 aa8.78□□□□□ -1
GCN1-202ENST00000547263 SLC25A48Q6ZT89 311 aaKnown RBP8.78□□□□□ -1
GCN1-202ENST00000547263 THNSL2Q86YJ6 484 aa8.78□□□□□ -1
GCN1-202ENST00000547263 TSPAN14Q8NG11 270 aa8.78□□□□□ -1
GCN1-202ENST00000547263 OR4K15Q8NH41 348 aa8.78□□□□□ -1
GCN1-202ENST00000547263 RFESDQ8TAC1 157 aa8.78□□□□□ -1
GCN1-202ENST00000547263 WFDC12Q8WWY7 111 aa8.78□□□□□ -1
GCN1-202ENST00000547263 CFHR4Q92496 578 aa8.78□□□□□ -1
GCN1-202ENST00000547263 NEDD4LQ96PU5 975 aa8.78□□□□□ -1
GCN1-202ENST00000547263 OCSTAMPQ9BR26 566 aa8.78□□□□□ -1
GCN1-202ENST00000547263 FAAP24Q9BTP7 215 aa8.78□□□□□ -1
GCN1-202ENST00000547263 RIMS4Q9H426 269 aaPredicted RBP8.78□□□□□ -1
GCN1-202ENST00000547263 RAB18Q9NP72 206 aa8.78□□□□□ -1
GCN1-202ENST00000547263 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.78□□□□□ -1
GCN1-202ENST00000547263 RAB22AQ9UL26 194 aa8.78□□□□□ -1
GCN1-202ENST00000547263 SSR3Q9UNL2 185 aa8.78□□□□□ -1
GCN1-202ENST00000547263 KCNK7Q9Y2U2 307 aa8.78□□□□□ -1
GCN1-202ENST00000547263 UBE2QL1A1L167 161 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 FAM172BPA6NC97 362 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 MFNGO00587 321 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 TMEM127O75204 238 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 CRYBA1P05813 215 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 SMIM18P0DKX4 95 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 CD36P16671 472 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 GADD45AP24522 165 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 CEACAM3P40198 252 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 EFNB2P52799 333 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 EBI3Q14213 229 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 NEDD8Q15843 81 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 FAM189A2Q15884 450 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 HES5Q5TA89 166 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 OLFML2AQ68BL7 652 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 FAM53AQ6NSI3 398 aaPredicted RBP8.77□□□□□ -1.01
GCN1-202ENST00000547263 C16orf82Q7Z2V1 217 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 OR56B1Q8NGI3 324 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 NDNFQ8TB73 568 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 NEK7Q8TDX7 302 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 WIPF2Q8TF74 440 aaPredicted RBP8.77□□□□□ -1.01
GCN1-202ENST00000547263 CCDC107Q8WV48 283 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 CITED1Q99966 193 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 CENPOQ9BU64 300 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 PECRQ9BY49 303 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 TOLLIPQ9H0E2 274 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 LIN7BQ9HAP6 207 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 BEX1Q9HBH7 125 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 TAF9BQ9HBM6 251 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 RAB9BQ9NP90 201 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 TNFRSF19Q9NS68 423 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 JPT1Q9UK76 154 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 PITPNC1Q9UKF7 332 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 TRAPPC2LQ9UL33 140 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 AMMECR1Q9Y4X0 333 aaPredicted RBP8.77□□□□□ -1.01
GCN1-202ENST00000547263 HILPDAQ9Y5L2 63 aa8.77□□□□□ -1.01
GCN1-202ENST00000547263 SDCBPO00560 298 aaPredicted RBP8.76□□□□□ -1.01
GCN1-202ENST00000547263 TOR1AO14656 332 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 ITGB1BP1O14713 200 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 SPINT2O43291 252 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 YPEL1O60688 119 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 NFYBP25208 207 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 RAB7AP51149 207 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 RAB13P51153 203 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 ZNF134P52741 427 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 KRTAP10-3P60369 221 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 MADCAM1Q13477 382 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 DIAPH2-AS1Q14236 149 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 MOGAT2Q3SYC2 334 aa8.76□□□□□ -1.01
GCN1-202ENST00000547263 MORN2Q502X0 79 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms