RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 LY6EQ16553 131 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 C19orf54Q5BKX5 351 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 PRAMEF5Q5TYX0 476 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 RSBN1Q5VWQ0 802 aaPredicted RBP5.96□□□□□ -1.46
CPSF7-224ENST00000544990 OR10A7Q8NGE5 316 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 C17orf50Q8WW18 174 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 TAF15Q92804 592 aaKnown RBP eCLIP5.96□□□□□ -1.46
CPSF7-224ENST00000544990 TMEM203Q969S6 136 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 YTHDF1Q9BYJ9 559 aaKnown RBP5.96□□□□□ -1.46
CPSF7-224ENST00000544990 SELENOIQ9C0D9 397 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 CST11Q9H112 138 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 PPIL3Q9H2H8 161 aaKnown RBP5.96□□□□□ -1.46
CPSF7-224ENST00000544990 RAB9BQ9NP90 201 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 CALYQ9NYX4 217 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 DPM3Q9P2X0 92 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 PITPNC1Q9UKF7 332 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 HILPDAQ9Y5L2 63 aa5.96□□□□□ -1.46
CPSF7-224ENST00000544990 A0A087X0M5 115 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 A0A1B0GX30 115 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 CA11O75493 328 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 TSPAN9O75954 239 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 TSPAN15O95858 294 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 IL1AP01583 271 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 GLAP06280 429 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 UCHL1P09936 223 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 CGB3P0DN86 165 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 CGB7P0DN87 165 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 FUT3P21217 361 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 NFYBP25208 207 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 PAX6P26367 422 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 HTR2CP28335 458 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 GABRA5P31644 462 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 BRS3P32247 399 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 MAP2K4P45985 399 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 PSMD7P51665 324 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 DYNLT3P51808 116 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 INSL4Q14641 139 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 C17orf58Q2M2W7 97 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 PLA1AQ53H76 456 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 C1orf100Q5SVJ3 147 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 FAM27D1Q5T7N8 215 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 SLC16A12Q6ZSM3 486 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 Q6ZSV7 163 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 ZNF367Q7RTV3 350 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 LRRTM1Q86UE6 522 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 LYPD6Q86Y78 171 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 OR13A1Q8NGR1 328 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 OR9G1Q8NH87 305 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 LINC01006Q8NI28 216 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 KCNG3Q8TAE7 436 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 PLPPR1Q8TBJ4 325 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 MRGPRDQ8TDS7 321 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 SPATA25Q9BR10 227 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 BANF2Q9H503 90 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 C16orf95Q9H693 158 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 ACOT13Q9NPJ3 140 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 IDI2-AS1Q9NZ38 188 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 SCOCQ9UIL1 159 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 RRP15Q9Y3B9 282 aaKnown RBP5.95□□□□□ -1.46
CPSF7-224ENST00000544990 AMMECR1Q9Y4X0 333 aaPredicted RBP5.95□□□□□ -1.46
CPSF7-224ENST00000544990 LRRC42Q9Y546 428 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 PEX16Q9Y5Y5 336 aa5.95□□□□□ -1.46
CPSF7-224ENST00000544990 FAM172BPA6NC97 362 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 OOSP1A8MZH6 123 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 NPIPB11E5RHQ5 1161 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 NPIPB6E9PJ23 425 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 BUB1B-PAK6H3BSN5 160 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 AIPO00170 330 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 F2RL2O00254 374 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 ORC5O43913 435 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 IGLV1-47P01700 117 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 MNDAP41218 407 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 KIR2DS4P43632 304 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 RAB13P51153 203 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 LINC00310P59036 64 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 RPS25P62851 125 aaKnown RBP5.94□□□□□ -1.46
CPSF7-224ENST00000544990 EMX1Q04741 257 aaPredicted RBP5.94□□□□□ -1.46
CPSF7-224ENST00000544990 HLA-DRB5Q30154 266 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 C6orf183Q5T699 404 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 RAB12Q6IQ22 244 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 CCDC144NLQ6NUI1 221 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 C11orf88Q6PI97 169 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 TRAT1Q6PIZ9 186 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 ZNF497Q6ZNH5 498 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 TMEM91Q6ZNR0 172 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 DYNAPQ8N1N2 210 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 PRR18Q8N4B5 295 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 TMEM104Q8NE00 496 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 OR4P4Q8NGL7 312 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 OR6M1Q8NGM8 313 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 OR4C13Q8NGP0 309 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 OR2T6Q8NHC8 308 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 RFESDQ8TAC1 157 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 PIFOQ8TCI5 191 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 CCDC107Q8WV48 283 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 ARL11Q969Q4 196 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 FAM46BQ96A09 425 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 NEDD4LQ96PU5 975 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 TMEM59Q9BXS4 323 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 NPFFR1Q9GZQ6 430 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms