RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 LINC00311Q8N616 119 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 DTX3Q8N9I9 347 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 OR4C13Q8NGP0 309 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 RFESDQ8TAC1 157 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 MRPL30Q8TCC3 161 aaKnown RBP10.54□□□□□ -0.72
LTBR-208ENST00000541005 CCDC107Q8WV48 283 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 ARL11Q969Q4 196 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 NEDD4LQ96PU5 975 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 NICN1Q9BSH3 213 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 NPFFR1Q9GZQ6 430 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 LPAR5Q9H1C0 372 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 GFOD1Q9NXC2 390 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 PSG11Q9UQ72 335 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 RNF114Q9Y508 228 aa10.54□□□□□ -0.72
LTBR-208ENST00000541005 NBEAL1Q6ZS30 2694 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 UBE2QL1A1L167 161 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 FOXI3A8MTJ6 420 aaPredicted RBP10.53□□□□□ -0.72
LTBR-208ENST00000541005 SDCBPO00560 298 aaPredicted RBP10.53□□□□□ -0.72
LTBR-208ENST00000541005 JUNBP17275 347 aaPredicted RBP10.53□□□□□ -0.72
LTBR-208ENST00000541005 BRS3P32247 399 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 KIR2DS4P43632 304 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 RAB13P51153 203 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 MADCAM1Q13477 382 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 NKAPLQ5M9Q1 402 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 C11orf88Q6PI97 169 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 OR4K15Q8NH41 348 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 SGMS2Q8NHU3 365 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 LEAP2Q969E1 77 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 FAM3DQ96BQ1 224 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 CYYR1Q96J86 154 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 CITED1Q99966 193 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 SULT4A1Q9BR01 284 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 URM1Q9BTM9 101 aaKnown RBP10.53□□□□□ -0.72
LTBR-208ENST00000541005 STEAP1Q9UHE8 339 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 TRAPPC2LQ9UL33 140 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 HSF4Q9ULV5 492 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 STUB1Q9UNE7 303 aa10.53□□□□□ -0.72
LTBR-208ENST00000541005 TRBV6-6A0A0A6YYG2 114 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 IFITM5A6NNB3 132 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 SPINT2O43291 252 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 NAPSAO96009 420 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 HBZP02008 142 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 RCC1P18754 421 aaPredicted RBP10.52□□□□□ -0.73
LTBR-208ENST00000541005 EFNB2P52799 333 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 OR10A3P58181 314 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 LTC4SQ16873 150 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 C22orf42Q6IC83 251 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 C16orf82Q7Z2V1 217 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 C6orf201Q7Z4U5 140 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 OR51D1Q8NGF3 324 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 RPEQ96AT9 228 aa10.52□□□□□ -0.73
LTBR-208ENST00000541005 TXNL4BQ9NX01 149 aaKnown RBP10.52□□□□□ -0.73
LTBR-208ENST00000541005 A0A1W2PPI3 338 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 IGHV3-7P01780 117 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 RAB3BP20337 219 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 BLVRBP30043 206 aaPredicted RBP10.51□□□□□ -0.73
LTBR-208ENST00000541005 MNDAP41218 407 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 GNG10P50151 68 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 RAB7AP51149 207 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 ZNF137PP52743 207 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 CLDN12P56749 244 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 KRTAP10-3P60369 221 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 HABP2Q14520 560 aaPredicted RBP10.51□□□□□ -0.73
LTBR-208ENST00000541005 C2orf76Q3KRA6 126 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 PRR31Q5SQ13 230 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 HES5Q5TA89 166 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 ZNF880Q6PDB4 577 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 MOB1BQ7L9L4 216 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 NR2C2APQ86WQ0 139 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 TMEM219Q86XT9 240 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 OR8H3Q8N146 312 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 ZNF439Q8NDP4 499 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 OR1L1Q8NH94 360 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 TOMM40LQ969M1 308 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 OCSTAMPQ9BR26 566 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 FAAP24Q9BTP7 215 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 ZNF696Q9H7X3 374 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 ZNF702PQ9H963 129 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 LIN7BQ9HAP6 207 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 TAF9BQ9HBM6 251 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 PKD1L1Q8TDX9 2849 aa10.51□□□□□ -0.73
LTBR-208ENST00000541005 TMEM272A0A1B0GTI8 110 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 FAM90A9PA6NNJ1 464 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 SOCS1O15524 211 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 RAB6AP20340 208 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 HTD2P86397 168 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 ZNF816Q0VGE8 651 aaPredicted RBP10.5□□□□□ -0.73
LTBR-208ENST00000541005 HMGN3Q15651 99 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 LY6G6FQ5SQ64 297 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 STEAP3Q658P3 488 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 Q6ZPA2 131 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 SLC25A48Q6ZT89 311 aaKnown RBP10.5□□□□□ -0.73
LTBR-208ENST00000541005 TPRA1Q86W33 373 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 THNSL2Q86YJ6 484 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 OR56B1Q8NGI3 324 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 OR10X1Q8NGY0 326 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 OR2T6Q8NHC8 308 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 UBALD1Q8TB05 177 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 CFHR4Q92496 578 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 ST6GALNAC6Q969X2 333 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms