RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 KLK15Q9H2R5 256 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 ORC6Q9Y5N6 252 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 C12orf77C9JDV5 145 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 SERPINA2P20848 420 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 RAB40BQ12829 278 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 ZNF260Q3ZCT1 412 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 KLHL22Q53GT1 634 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 ATAD3CQ5T2N8 411 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 MYOZ3Q8TDC0 251 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 GPR148Q8TDV2 347 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 C4orf3Q8WVX3 66 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 APH1BQ8WW43 257 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 TMEM106AQ96A25 262 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 CPNE2Q96FN4 548 aaPredicted RBP14.06□□□□□ -0.16
UBXN1-216ENST00000533908 RITA1Q96K30 269 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 KCTD7Q96MP8 289 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 SLC29A1Q99808 456 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 RASL11BQ9BPW5 248 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 TMEM138Q9NPI0 162 aa14.06□□□□□ -0.16
UBXN1-216ENST00000533908 HUWE1Q7Z6Z7 4374 aaKnown RBP14.06□□□□□ -0.16
UBXN1-216ENST00000533908 CSTBP04080 98 aaKnown RBP14.05□□□□□ -0.16
UBXN1-216ENST00000533908 IGF1P05019 195 aa14.05□□□□□ -0.16
UBXN1-216ENST00000533908 SOX6P35712 828 aa14.05□□□□□ -0.16
UBXN1-216ENST00000533908 ZNF93P35789 620 aaPredicted RBP14.05□□□□□ -0.16
UBXN1-216ENST00000533908 ZNF137PP52743 207 aa14.05□□□□□ -0.16
UBXN1-216ENST00000533908 DDI2Q5TDH0 399 aa14.05□□□□□ -0.16
UBXN1-216ENST00000533908 SLC25A48Q6ZT89 311 aaKnown RBP14.05□□□□□ -0.16
UBXN1-216ENST00000533908 C5orf24Q7Z6I8 188 aa14.05□□□□□ -0.16
UBXN1-216ENST00000533908 OR11H1Q8NG94 326 aa14.05□□□□□ -0.16
UBXN1-216ENST00000533908 GNB4Q9HAV0 340 aa14.05□□□□□ -0.16
UBXN1-216ENST00000533908 MAGEA13PA6NCF6 341 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 ATP5HO75947 161 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 PPIFP30405 207 aaKnown RBP14.04□□□□□ -0.16
UBXN1-216ENST00000533908 ETV1P50549 477 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 SMN1Q16637 294 aaKnown RBP14.04□□□□□ -0.16
UBXN1-216ENST00000533908 MPV17LQ2QL34 196 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 OR2G6Q5TZ20 316 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 RPL22L1Q6P5R6 122 aaKnown RBP14.04□□□□□ -0.16
UBXN1-216ENST00000533908 OR8H1Q8NGG4 311 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 OR10V1Q8NGI7 309 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 OR13C5Q8NGS8 318 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 OR1L1Q8NH94 360 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 Q96MT0 163 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 MYCBPQ99417 103 aaPredicted RBP14.04□□□□□ -0.16
UBXN1-216ENST00000533908 FGF20Q9NP95 211 aaPredicted RBP14.04□□□□□ -0.16
UBXN1-216ENST00000533908 ZNF256Q9Y2P7 627 aaPredicted RBP14.04□□□□□ -0.16
UBXN1-216ENST00000533908 WSB1Q9Y6I7 421 aa14.04□□□□□ -0.16
UBXN1-216ENST00000533908 G3V318 75 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 AIPO00170 330 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 RRP9O43818 475 aaKnown RBP14.03□□□□□ -0.16
UBXN1-216ENST00000533908 CIB2O75838 187 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 LALBAP00709 142 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 CD2P06729 351 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 SLC2A2P11168 524 aaPredicted RBP14.03□□□□□ -0.16
UBXN1-216ENST00000533908 IGFBP3P17936 291 aaPredicted RBP14.03□□□□□ -0.16
UBXN1-216ENST00000533908 VDAC1P21796 283 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 IL3RAP26951 378 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 BDKRB2P30411 391 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 Q3ZCU0 254 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 SLC22A6Q4U2R8 563 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 SYT6Q5T7P8 510 aaPredicted RBP14.03□□□□□ -0.16
UBXN1-216ENST00000533908 OR4K15Q8NH41 348 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 NEK7Q8TDX7 302 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 RCC2Q9P258 522 aaKnown RBP14.03□□□□□ -0.16
UBXN1-216ENST00000533908 ZNF580Q9UK33 172 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 TENM2Q9NT68 2774 aa14.03□□□□□ -0.16
UBXN1-216ENST00000533908 C3orf84H3BNL1 204 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 I3L521 148 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 OGG1O15527 345 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 WBP4O75554 376 aaKnown RBP14.02□□□□□ -0.17
UBXN1-216ENST00000533908 HBZP02008 142 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 RCC1P18754 421 aaPredicted RBP14.02□□□□□ -0.17
UBXN1-216ENST00000533908 CNTFRP26992 372 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 CHATP28329 748 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 ADARB1P78563 741 aaKnown RBP14.02□□□□□ -0.17
UBXN1-216ENST00000533908 CCDC58Q4VC31 144 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 LINC00596Q86U02 117 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 GAPTQ8N292 157 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 ZNF491Q8N8L2 437 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 OR1N2Q8NGR9 330 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 OR5B12Q96R08 314 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 ZNF184Q99676 751 aaPredicted RBP14.02□□□□□ -0.17
UBXN1-216ENST00000533908 GNG12Q9UBI6 72 aa14.02□□□□□ -0.17
UBXN1-216ENST00000533908 ZNF107Q9UII5 783 aaPredicted RBP14.02□□□□□ -0.17
UBXN1-216ENST00000533908 RPL36Q9Y3U8 105 aaKnown RBP14.02□□□□□ -0.17
UBXN1-216ENST00000533908 TRAV8-7A0A075B6U6 113 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 LOC100130705A0A1B0GUX0 176 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 IGLV1-40P01703 118 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 GTF2F2P13984 249 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 MYF6P23409 242 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 GNB1P62873 340 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 PPP3R1P63098 170 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 LSAMPQ13449 338 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 SBSPONQ8IVN8 264 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 PRR18Q8N4B5 295 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 UBE2E2Q96LR5 201 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 S100A13Q99584 98 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 TRAPPC2LQ9UL33 140 aa14.01□□□□□ -0.17
UBXN1-216ENST00000533908 DYNC2H1Q8NCM8 4307 aaKnown RBP14.01□□□□□ -0.17
UBXN1-216ENST00000533908 TRBV5-5A0A0J9YX44 114 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms