RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 IL22Q9GZX6 179 aa1.64□□□□□ -2.15
CD44-233ENST00000531141 NAA50Q9GZZ1 169 aaKnown RBP1.64□□□□□ -2.15
CD44-233ENST00000531141 ABCG5Q9H222 651 aa1.64□□□□□ -2.15
CD44-233ENST00000531141 C8orf33Q9H7E9 229 aaPredicted RBP1.64□□□□□ -2.15
CD44-233ENST00000531141 OR2S2Q9NQN1 319 aa1.64□□□□□ -2.15
CD44-233ENST00000531141 MMACHCQ9Y4U1 282 aa1.64□□□□□ -2.15
CD44-233ENST00000531141 GMEB1Q9Y692 573 aa1.64□□□□□ -2.15
CD44-233ENST00000531141 NBASA2RRP1 2371 aa1.64□□□□□ -2.15
CD44-233ENST00000531141 RAD50Q92878 1312 aa1.64□□□□□ -2.15
CD44-233ENST00000531141 NBEAL2Q6ZNJ1 2754 aa1.64□□□□□ -2.15
CD44-233ENST00000531141 KIAA1671Q9BY89 1806 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 MCM3APO60318 1980 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 SCN10AQ9Y5Y9 1956 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 TANC1Q9C0D5 1861 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 HSBP1L1C9JCN9 74 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 C9JQL5 133 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 C15orf65H3BRN8 121 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 YEATS4O95619 227 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 CRYGCP07315 174 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 HLA-EP13747 358 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 MAP3K7CLP57077 242 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 DAOAP59103 153 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 STK38Q15208 465 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 FBXL19-AS1Q494R0 122 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 CDNFQ49AH0 187 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 LDLRAD2Q5SZI1 272 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 PIP5KL1Q5T9C9 394 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 TTC19Q6DKK2 380 aaPredicted RBP1.63□□□□□ -2.15
CD44-233ENST00000531141 PAGE2Q7Z2X7 111 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 LY6G5BQ8NDX9 201 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 OR4D6Q8NGJ1 314 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 OR5H2Q8NGV7 314 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 FAM57AQ8TBR7 257 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 ZFAND1Q8TCF1 268 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 MITD1Q8WV92 249 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 ANP32BQ92688 251 aaKnown RBP1.63□□□□□ -2.15
CD44-233ENST00000531141 PAIP2Q9BPZ3 127 aaKnown RBP1.63□□□□□ -2.15
CD44-233ENST00000531141 DUSP21Q9H596 190 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 CHRAC1Q9NRG0 131 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 MYH13Q9UKX3 1938 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 F5P12259 2224 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 PTPRBP23467 1997 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 CSMD2Q7Z408 3487 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 PLXNA4Q9HCM2 1894 aa1.63□□□□□ -2.15
CD44-233ENST00000531141 MYH3P11055 1940 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 MYH2Q9UKX2 1941 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 COL6A5A8TX70 2615 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 IGHV2OR16-5A0A0B4J2B6 119 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 LOC100506127A0A0U1RQW1 187 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 J3QT63 122 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 K7ERQ8 282 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 CXorf1O96002 111 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 NPPAP01160 153 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 TEAD1P28347 426 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 SLC6A1P30531 599 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 TGFBR2P37173 567 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 PI4KAP42356 2102 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 GZMMP51124 257 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 HCCSP53701 268 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 PSMD4P55036 377 aaKnown RBP1.62□□□□□ -2.15
CD44-233ENST00000531141 LCN2P80188 198 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 FMODQ06828 376 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 TNFRSF9Q07011 255 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 ST3GAL4Q11206 333 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 HTR4Q13639 388 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 SLC9A3R2Q15599 337 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 ZNF141Q15928 474 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 Q3ZCU0 254 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 PYDC2Q56P42 97 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 HSP90AA4PQ58FG1 418 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 LIN9Q5TKA1 542 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 WDR59Q6PJI9 974 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 MRPL21Q7Z2W9 205 aaKnown RBP1.62□□□□□ -2.15
CD44-233ENST00000531141 OR2W3Q7Z3T1 314 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 COMTD1Q86VU5 262 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 TRIML2Q8N7C3 387 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 SUN5Q8TC36 379 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 ACTL9Q8TC94 416 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 OR8D1Q8WZ84 308 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 OTUB2Q96DC9 234 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 MSANTD3Q96H12 275 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 RNF170Q96K19 258 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 DERL3Q96Q80 235 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 BLZF1Q9H2G9 400 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 ARMC7Q9H6L4 198 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 C6orf50Q9HD87 102 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 ABCB9Q9NP78 766 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 NUP205Q92621 2012 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 JMJD1CQ15652 2540 aa1.62□□□□□ -2.15
CD44-233ENST00000531141 CSPG4Q6UVK1 2322 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 A0A1W2PRF3 423 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 A0A1W2PRM7 423 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 J3QRE1 110 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 AKR7A2O43488 359 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 NDUFS5O43920 106 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 CSTAP01040 98 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 APOA1P02647 267 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 CDK1P06493 297 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 SEC11BP0C7V7 166 aa1.61□□□□□ -2.15
CD44-233ENST00000531141 PAX6P26367 422 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms