RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 DNAJC27Q9NZQ0 273 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 EXTL2Q9UBQ6 330 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 PSORS1C1Q9UIG5 152 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNF391Q9UJN7 358 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 RABL2BQ9UNT1 228 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 BAIAP2Q9UQB8 552 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 SIGLEC9Q9Y336 463 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 RHBDD3Q9Y3P4 386 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 OR2AT4A6NND4 320 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 RIIAD1A6NNX1 92 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNF850A8MQ14 1090 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 TNFRSF11BO00300 401 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 AKR7A2O43488 359 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 ANGPTL7O43827 346 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 CCNB2O95067 398 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 CST4P01036 141 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 GYPBP06028 91 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 H2BFMP0C1H6 154 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNF3P17036 446 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 SPI1P17947 270 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 GLRA1P23415 457 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 PRDX6P30041 224 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 GABRA2P47869 451 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 DLX1P56177 255 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNF121P58317 390 aaPredicted RBP4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 HERV-K104P61576 105 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 PRDX4Q13162 271 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 CRMP1Q14194 572 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 LY6EQ16553 131 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 DGUOKQ16854 277 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 SAMD4BQ5PRF9 694 aaKnown RBP4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 ERI1Q8IV48 349 aaKnown RBP4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 LRTM2Q8N967 370 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 OR2T33Q8NG76 320 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 OR9Q2Q8NGE9 314 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 OR6N2Q8NGY6 317 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 ANGPTL6Q8NI99 470 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 MRAPQ8TCY5 172 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNRF4Q8WWF5 429 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 OR5P3Q8WZ94 311 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 RPL3LQ92901 407 aaKnown RBP4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 RNF170Q96K19 258 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 DUX3Q96PT4 197 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 TSSK6Q9BXA6 273 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 NMNAT2Q9BZQ4 307 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 WDR13Q9H1Z4 485 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 HEXA-AS1Q9H8Q6 139 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 IL20Q9NYY1 176 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 FOXJ3Q9UPW0 622 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 PYGO1Q9Y3Y4 419 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 EPPK1P58107 5090 aaKnown RBP4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
AMBRA1-209ENST00000529963 CHEK1O14757 476 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 SOX14O95416 240 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 PRB2P02812 416 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 CLUP10909 449 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 HSD17B1P14061 328 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 OPRL1P41146 370 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 GPM6AP51674 278 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 GNG3P63215 75 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 EMX1Q04741 257 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 GABPB1Q06547 395 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 NSUN5P1Q3KNT7 163 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 TMEM30BQ3MIR4 351 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 KLHL12Q53G59 568 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 NDUFA11Q86Y39 141 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 AQP11Q8NBQ7 271 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 OR4F17Q8NGA8 305 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 OR8D4Q8NGM9 314 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 OR4Q3Q8NH05 313 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 OR5K1Q8NHB7 308 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 ZNF671Q8TAW3 534 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 FAM81AQ8TBF8 368 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 PIGCQ92535 297 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 RORBQ92753 470 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 ITFG2Q969R8 447 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 OR4F4Q96R69 305 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 NKX3-1Q99801 234 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 TPPP3Q9BW30 176 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 ELL3Q9HB65 397 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 ARMC1Q9NVT9 282 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 NECAP2Q9NVZ3 263 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 RRP15Q9Y3B9 282 aaKnown RBP4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 PLXNB1O43157 2135 aa4.02□□□□□ -1.77
AMBRA1-209ENST00000529963 IGKV1D-17A0A075B6S4 117 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 TRBV5-5A0A0J9YX44 114 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 A0A0U1RRA0 63 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 SLC1A7O00341 560 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 DFFBO76075 338 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 TFF1P04155 84 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 ALDOBP05062 364 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 KRT8P05787 483 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 LYNP07948 512 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 PSG2P11465 335 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 COX7A1P24310 79 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 ACKR3P25106 362 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 SOX6P35712 828 aa4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 RPL31P62899 125 aaKnown RBP4.01□□□□□ -1.77
AMBRA1-209ENST00000529963 TMEM187Q14656 261 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms