RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 MTCH1Q9NZJ7 389 aa4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 ACTR3BQ9P1U1 418 aa4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 DPM3Q9P2X0 92 aa4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 NUFIP1Q9UHK0 495 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 LINC00527Q9UJ94 153 aa4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 OR52A1Q9UKL2 312 aa4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 BLOC1S6Q9UL45 172 aa4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 COPS3Q9UNS2 423 aa4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 SLC7A11Q9UPY5 501 aa4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 LINC00312Q9Y6C7 94 aa4.14□□□□□ -1.75
CTNNA1-239ENST00000523685 IGKV1-27A0A075B6S5 117 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 ARRDC5A6NEK1 342 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 CCDC182A6NF36 153 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 SERPINE3A8MV23 424 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 LEUTXA8MZ59 168 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 M0R129 80 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 TOR1AO14656 332 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 SNX3O60493 162 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 ZNF254O75437 659 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 ATP5HO75947 161 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 OR2F2O95006 317 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 CST1P01037 141 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 IGLV3-1P01715 115 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 IGHV3-7P01780 117 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 PRKACAP17612 351 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 GABRB1P18505 474 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 BCL3P20749 454 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 PRKACGP22612 351 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 CALB2P22676 271 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 SLC2A5P22732 501 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 CDK2P24941 298 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 MPZP25189 248 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 NFYBP25208 207 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 POU3F4P49335 361 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 THBS3P49746 956 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 CAMPP49913 170 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 LUMP51884 338 aaPredicted RBP4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 CXCR4P61073 352 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 ERVK11-1P61568 191 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 RPL23AP62750 156 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 SCN1BQ07699 218 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 IL24Q13007 206 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 TMED1Q13445 227 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 HES1Q14469 280 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 IRF3Q14653 427 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 LCN1P1Q5VSP4 162 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 SLX4IPQ5VYV7 408 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 TMEM42Q69YG0 159 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 DEGS2Q6QHC5 323 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 ZNF322Q6U7Q0 402 aaPredicted RBP4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 ZBTB49Q6ZSB9 765 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 KRT74Q7RTS7 529 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 C16orf82Q7Z2V1 217 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 OR2W3Q7Z3T1 314 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 TMEM179BQ7Z7N9 219 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 FOXRED2Q8IWF2 684 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 HS3ST5Q8IZT8 346 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 OSR2Q8N2R0 312 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 KLHL30-AS1Q8NEE0 82 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 ASB17Q8WXJ9 295 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 CCDC124Q96CT7 223 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 BORCS8Q96FH0 119 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 RBM14Q96PK6 669 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 CNN2Q99439 309 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 TBX5Q99593 518 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 MCRIP2Q9BUT9 160 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 PKIBQ9C010 78 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 VCX3BQ9H321 246 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 MAGIXQ9H6Y5 334 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 VCX3AQ9NNX9 186 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 RBFOX1Q9NWB1 397 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 NDE1Q9NXR1 346 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 FBXL17Q9UF56 701 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 GLS2Q9UI32 602 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 TMEM14AQ9Y6G1 99 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 R4GMQ9 66 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 V9GYS6 101 aa4.13□□□□□ -1.75
CTNNA1-239ENST00000523685 TRGV10A0A0A0MS01 117 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 A0A1B0GTI1 187 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 ZNF670-ZNF695F2Z2N8 137 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 SYT7O43581 403 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 SRSF10O75494 262 aaKnown RBP4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 CYB5AP00167 134 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 SNRNP70P08621 437 aaKnown RBP4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 FAM106CPP0CH98 169 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 IGHV4-30-4P0DP06 118 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 BDKRB2P30411 391 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 CEACAM3P40198 252 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 MYCNOSP40205 109 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 MNDAP41218 407 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 RANBP1P43487 201 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 OR3A1P47881 315 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 GLIPR1P48060 266 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 NPBWR2P48146 333 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 FUT6P51993 359 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 ACTR3P61158 418 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 CDK5Q00535 292 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 MS4A2Q01362 244 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 BDH1Q02338 343 aa4.12□□□□□ -1.75
CTNNA1-239ENST00000523685 AESQ08117 197 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms