RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 GNMTQ14749 295 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 HES5Q5TA89 166 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 UBE2UQ5VVX9 321 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 CD200R1LQ6Q8B3 271 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 NR2C2APQ86WQ0 139 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 PRR18Q8N4B5 295 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 C11orf44Q8N8P7 122 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 OR10V1Q8NGI7 309 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 SGMS2Q8NHU3 365 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 HDHD3Q9BSH5 251 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-219ENST00000518824 CST11Q9H112 138 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 PLGRKTQ9HBL7 147 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 SPACA1Q9HBV2 294 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 SERTAD4Q9NUC0 356 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 LRRC42Q9Y546 428 aa10.65□□□□□ -0.7
VEGFA-219ENST00000518824 A0A1W2PPI3 338 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 FOXI3A8MTJ6 420 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-219ENST00000518824 TIMM23O14925 209 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 ARL6IP5O75915 188 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 BPNT1O95861 308 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 AMY1AP04745 511 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 AMY2AP04746 511 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 PSMA1P25786 263 aaKnown RBP10.64□□□□□ -0.71
VEGFA-219ENST00000518824 PSMB9P28065 219 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 REG1BP48304 166 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 ZNF134P52741 427 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 TMEM50BP56557 158 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 RAB11BQ15907 218 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 C2orf76Q3KRA6 126 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 PRR31Q5SQ13 230 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 C22orf42Q6IC83 251 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 LIAT1Q6ZQX7 453 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 DRAM1Q8N682 238 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 ZNF439Q8NDP4 499 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 OR10A7Q8NGE5 316 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 OR4C13Q8NGP0 309 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 KCNG3Q8TAE7 436 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 CFHR4Q92496 578 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 NPFFR1Q9GZQ6 430 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 Q9H521 79 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 RANBP3Q9H6Z4 567 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-219ENST00000518824 ZNF696Q9H7X3 374 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 TAF9BQ9HBM6 251 aa10.64□□□□□ -0.71
VEGFA-219ENST00000518824 MBNL3Q9NUK0 354 aaKnown RBP10.64□□□□□ -0.71
VEGFA-219ENST00000518824 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 CMYA5Q8N3K9 4069 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 IGHV3-72A0A0B4J1Y9 119 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 TMEM272A0A1B0GTI8 110 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 TRDV1A0A1B0GX56 115 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 LDLRAD4O15165 306 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 MRPS14O60783 128 aaKnown RBP10.63□□□□□ -0.71
VEGFA-219ENST00000518824 VSIG10L2P0DP72 767 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 ARSBP15848 533 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 BLVRBP30043 206 aaPredicted RBP10.63□□□□□ -0.71
VEGFA-219ENST00000518824 Q8N2B8 174 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 SVOPQ8N4V2 548 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 KLHDC1Q8N7A1 406 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 OR52L2PQ8NGH6 319 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 OR56B4Q8NH76 319 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 CAPSLQ8WWF8 208 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 TOMM40LQ969M1 308 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 RPEQ96AT9 228 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 FAM3DQ96BQ1 224 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 NEDD4LQ96PU5 975 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 SLC25A33Q9BSK2 321 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 RNF167Q9H6Y7 350 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 RAB18Q9NP72 206 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 V9GY05 133 aa10.63□□□□□ -0.71
VEGFA-219ENST00000518824 WNK1Q9H4A3 2382 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 FAM90A9PA6NNJ1 464 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 CCRL2O00421 344 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 TSPAN15O95858 294 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 GLAP06280 429 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 SNRNP70P08621 437 aaKnown RBP10.62□□□□□ -0.71
VEGFA-219ENST00000518824 CEACAM3P40198 252 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 VEGFCP49767 419 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 MADCAM1Q13477 382 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 MOGAT2Q3SYC2 334 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 CT45A1Q5HYN5 189 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 PLAC9Q5JTB6 97 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 ZNF773Q6PK81 442 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 LYG1Q8N1E2 194 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 FAM89BQ8N5H3 189 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 OR52M1Q8NGK5 317 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 OR10X1Q8NGY0 326 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 OR2T6Q8NHC8 308 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 CT45A3Q8NHU0 189 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 ST6GALNAC6Q969X2 333 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 YTHDF1Q9BYJ9 559 aaKnown RBP10.62□□□□□ -0.71
VEGFA-219ENST00000518824 OR51E2Q9H255 320 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 AK3Q9UIJ7 227 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 PITPNC1Q9UKF7 332 aa10.62□□□□□ -0.71
VEGFA-219ENST00000518824 TRAV1-2A0A0B4J238 106 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 ZNF736B4DX44 427 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-219ENST00000518824 NAPSAO96009 420 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 SLC2A2P11168 524 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-219ENST00000518824 BRS3P32247 399 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 PPP1CCP36873 323 aaKnown RBP10.61□□□□□ -0.71
VEGFA-219ENST00000518824 HNF4GQ14541 408 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 C6orf183Q5T699 404 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms