RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 OR11H4Q8NGC9 324 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 C10orf35Q96D05 121 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 hADV38S2A0JD32 116 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 SOD3P08294 240 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 EPHA8P29322 1005 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-214ENST00000515035 PMELP40967 661 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 RNPS1Q15287 305 aaKnown RBP11.65□□□□□ -0.54
TCOF1-214ENST00000515035 ZIC1Q15915 447 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 TMEM92Q6UXU6 159 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 OR2W1Q9Y3N9 320 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 MS4A18H0YCH9 400 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 MYF5P13349 255 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 GZMMP51124 257 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 NXPH1P58417 271 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 LSM6P62312 80 aaKnown RBP11.64□□□□□ -0.55
TCOF1-214ENST00000515035 PMCHL1Q16048 86 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 MS4A18Q3C1V0 323 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 MYOZ3Q8TDC0 251 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 SP7Q8TDD2 431 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-214ENST00000515035 SERGEFQ9UGK8 458 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 C3orf80F5H4A9 247 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 H0YL77 283 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 HOXD4P09016 255 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-214ENST00000515035 ZNF362Q5T0B9 420 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-214ENST00000515035 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 ZNF600Q6ZNG1 722 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 CARFQ8N187 725 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 OR10D3Q8NH80 312 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 ADAMTS17Q8TE56 1095 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 PERPQ96FX8 193 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 TRGV5A0A0B4J1U4 118 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-214ENST00000515035 SPINK2P20155 84 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 MUC15Q8N387 334 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 TMEM204Q9BSN7 226 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 TUBD1Q9UJT1 453 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 TGIF2-C20orf24A0A0A6YYL0 155 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 K7ESF4 209 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 NANOS3P60323 173 aaKnown RBP11.64□□□□□ -0.55
TCOF1-214ENST00000515035 MEF2BQ02080 365 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-214ENST00000515035 TNXAQ16473 311 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 PLPPR5Q32ZL2 321 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 OR4X1Q8NH49 305 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 PTX4Q96A99 478 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 CES1P1Q9UKY3 287 aa11.64□□□□□ -0.55
TCOF1-214ENST00000515035 M0R3E3 92 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 KLK10O43240 276 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 PTP4A3O75365 173 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 HBZP02008 142 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 PSG2P11465 335 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 ACP1P24666 158 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 GALNSP34059 522 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 CEBPDP49716 269 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-214ENST00000515035 PSG6Q00889 435 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 HES3Q5TGS1 186 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 REC114Q7Z4M0 266 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 TMEM252Q8N6L7 170 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 DEFB124Q8NES8 71 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 RSG1Q9BU20 258 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 IL19Q9UHD0 177 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 BMI1P35226 326 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 PIGYQ3MUY2 71 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 NHLRC3Q5JS37 347 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 GUSBP11Q6P575 273 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 STXBP6Q8NFX7 210 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 RNF133Q8WVZ7 376 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 ZNF665Q9H7R5 613 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 OOEPA6NGQ2 149 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 CRYABP02511 175 aaKnown RBP11.63□□□□□ -0.55
TCOF1-214ENST00000515035 C10orf113Q5VZT2 155 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 OIT3Q8WWZ8 545 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 MFRPQ9BY79 579 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 AKIRIN1Q9H9L7 192 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-214ENST00000515035 ONECUT1Q9UBC0 465 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 DLEC1Q9Y238 1755 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 COL5A3P25940 1745 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-214ENST00000515035 MPTX1A8MV57 137 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 NDUFB4O95168 129 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 COL9A1P20849 921 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 NPY1RP25929 384 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 ZNF83P51522 516 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 SMRP1Q8NCR6 262 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 GPBAR1Q8TDU6 330 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 GGACTQ9BVM4 153 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 ZFP64Q9NPA5 681 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 APC2O95996 2303 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 IGHV5-51A0A0C4DH38 117 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 HIST1H1BP16401 226 aaKnown RBP11.63□□□□□ -0.55
TCOF1-214ENST00000515035 HIST1H2BAQ96A08 127 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 ALG14Q96F25 216 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 GMPPAQ96IJ6 420 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-214ENST00000515035 HDHD3Q9BSH5 251 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-214ENST00000515035 KCNK7Q9Y2U2 307 aa11.63□□□□□ -0.55
TCOF1-214ENST00000515035 MRPS18BQ9Y676 258 aaKnown RBP11.63□□□□□ -0.55
TCOF1-214ENST00000515035 RELBQ01201 579 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 VAX1Q5SQQ9 334 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 WDR25Q64LD2 544 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-214ENST00000515035 VSTM2LQ96N03 204 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms