RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TP53I11O14683 189 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 LIMS3P0CW19 117 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 LIMS4P0CW20 117 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 GABRA3P34903 492 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 DEFA6Q01524 100 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 PDGFRLQ15198 375 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 ZFAND2AQ8N6M9 145 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 YIPF7Q8N8F6 280 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 OR5D18Q8NGL1 313 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 HBEGFQ99075 208 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 TUBA4BQ9H853 241 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 DMAC2Q9NW81 257 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 COL18A1P39060 1754 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 DNMT1P26358 1616 aaKnown RBP1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 KIAA0232Q92628 1395 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 CHD2O14647 1828 aaKnown RBP1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 MYO5BQ9ULV0 1848 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 VWDEQ8N2E2 1590 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 TRPM3Q9HCF6 1732 aaPredicted RBP1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 EFCAB9A8MZ26 197 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 F5H5T6 163 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 K7ERQ8 282 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 CDK14O94921 469 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 ATF1P18846 271 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 SYT1P21579 422 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 BSPH1Q075Z2 132 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 PAFAH1B3Q15102 231 aaKnown RBP1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 TMEM249Q2WGJ8 235 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 SPIN4Q56A73 249 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 VN1R4Q7Z5H5 301 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 TCAIMQ8N3R3 496 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 C2orf73Q8N5S3 287 aaPredicted RBP1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 Q8NDZ9 215 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 BCL2L14Q9BZR8 327 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 AICDAQ9GZX7 198 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 LRRC19Q9H756 370 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 TAS2R9Q9NYW1 312 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 CCL26Q9Y258 94 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 BAHCC1Q9P281 2608 aa1.98□□□□□ -2.09
HMGCS1-207ENST00000514610 YKT6O15498 198 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 CRTAPO75718 401 aaPredicted RBP1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 CTSEP14091 401 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 ACTR1BP42025 376 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 FAM229BQ4G0N7 80 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 HENMT1Q5T8I9 393 aaKnown RBP1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 XKRXQ6PP77 449 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 ANGPTL6Q8NI99 470 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 RNASEH2CQ8TDP1 164 aaKnown RBP1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 GALMQ96C23 342 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 KLF6Q99612 283 aaPredicted RBP1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 C11orf49Q9H6J7 331 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 TREM1Q9NP99 234 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 MYO9BQ13459 2157 aa1.97□□□□□ -2.09
HMGCS1-207ENST00000514610 USP42Q9H9J4 1324 aaKnown RBP1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 TRGV4A0A0C4DH28 118 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 A8MWP6 167 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 K7EQS6 105 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 TOR1AO14656 332 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 DENRO43583 198 aaKnown RBP1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 MPZL2O60487 215 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 CRYGDP07320 174 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 PSMD7P51665 324 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 CENPWQ5EE01 88 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 MTERF4Q7Z6M4 381 aaKnown RBP1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 SELENOHQ8IZQ5 122 aaKnown RBP1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 DNAAF3Q8N9W5 541 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 TMEM56Q96MV1 263 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 FBXL3Q9UKT7 428 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 WASHC3Q9Y3C0 194 aa1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 SAMHD1Q9Y3Z3 626 aaKnown RBP1.96□□□□□ -2.1
HMGCS1-207ENST00000514610 ODF3BA8MYP8 253 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 B4DEV8 164 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 ZNF189O75820 626 aaPredicted RBP1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 RAB36O95755 333 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 PSMA1P25786 263 aaKnown RBP1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 GABARAPL2P60520 117 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 FAM3AP98173 230 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 HTR4Q13639 388 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 SYCP1Q15431 976 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 SDIM1Q6ZPB5 146 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 DOLPP1Q86YN1 238 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 C17orf78Q8N4C9 275 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 OR4P4Q8NGL7 312 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 OR4K13Q8NH42 304 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 DYNC2LI1Q8TCX1 351 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 GPR119Q8TDV5 335 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 GTF2H4Q92759 462 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 SLC19A3Q9BZV2 496 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 CHST5Q9GZS9 411 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 SCML1Q9UN30 329 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 HEY1Q9Y5J3 304 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 ITGB4P16144 1822 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 ATAD5Q96QE3 1844 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 TRPM6Q9BX84 2022 aa1.95□□□□□ -2.1
HMGCS1-207ENST00000514610 FAM25EA8MYX2 175 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 OVOL1O14753 267 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 P0DMU3 169 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 FAM231AP0DMU4 169 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 FAM231CP0DMU5 169 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms