RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MMP26Q9NRE1 261 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 IGKV1-6A0A0C4DH72 117 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 ZNF736B4DX44 427 aaPredicted RBP10.3□□□□□ -0.76
PDPN-210ENST00000513143 F2RL2O00254 374 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 SPINT2O43291 252 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 UPK1BO75841 260 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 DIRAS3O95661 229 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 HBZP02008 142 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 RBP4P02753 201 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 IGHV4-31P0DP07 118 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 TBPP20226 339 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 HLA-DMAP28067 261 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 GZMKP49863 264 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 TAS2R19P59542 299 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 HTD2P86397 168 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 HERPUD1Q15011 391 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 CHRFAM7AQ494W8 412 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 TRIQKQ629K1 86 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 HEPN1Q6WQI6 88 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 KIR3DL3Q8N743 410 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 OR10A7Q8NGE5 316 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 OR1L1Q8NH94 360 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 RFESDQ8TAC1 157 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 UBALD1Q8TB05 177 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 GALMQ96C23 342 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 MSI2Q96DH6 328 aaKnown RBP10.3□□□□□ -0.76
PDPN-210ENST00000513143 CABLES2Q9BTV7 478 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 INSIG2Q9Y5U4 225 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 ABCA1O95477 2261 aa10.3□□□□□ -0.76
PDPN-210ENST00000513143 TRAV20A0A0B4J274 112 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 M0R1W7 72 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 CD74P04233 296 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 CD3DP04234 171 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 CTXN2P0C2S0 81 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 FPR2P25090 351 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 DVL1P1P54792 670 aaPredicted RBP10.29□□□□□ -0.76
PDPN-210ENST00000513143 TAS2R46P59540 309 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 AP3S2P59780 193 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 ARPC4P59998 168 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 ARF6P62330 175 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 KLF9Q13886 244 aaPredicted RBP10.29□□□□□ -0.76
PDPN-210ENST00000513143 CDK10Q15131 360 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 TMEM30BQ3MIR4 351 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 ACTBL2Q562R1 376 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 IGSF11Q5DX21 431 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 STEAP1BQ6NZ63 245 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 BTNL3Q6UXE8 466 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 C1orf122Q6ZSJ8 110 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 PRR18Q8N4B5 295 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 TOMM5Q8N4H5 51 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 Q8N7P7 452 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 DEDD2Q8WXF8 326 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 BORCS5Q969J3 196 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 KIRREL1Q96J84 757 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 NECAP2Q9NVZ3 263 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 IDI2-AS1Q9NZ38 188 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 ONECUT1Q9UBC0 465 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 KPTNQ9Y664 436 aa10.29□□□□□ -0.76
PDPN-210ENST00000513143 SETXQ7Z333 2677 aaKnown RBP10.28□□□□□ -0.76
PDPN-210ENST00000513143 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
PDPN-210ENST00000513143 TRBV6-7A0A0A0MS04 114 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 hCG_1809904A0A1W2PP81 198 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 A0A1W2PPE2 198 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 A0A1W2PR64 198 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 A0A1W2PRV1 198 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 MMP23AO75900 390 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 PMP2P02689 132 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 AKAIN1P0CW23 69 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 OMGP23515 440 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 GATA3P23771 443 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 HRH1P35367 487 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 OR3A3P47888 321 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 RFX2P48378 723 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 INPP1P49441 399 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 LOXL3P58215 753 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 ERVFRD-1P60508 538 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 IFITM3Q01628 133 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 PAX8Q06710 450 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 DYRK1AQ13627 763 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 VAX1Q5SQQ9 334 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 PRAMEF5Q5TYX0 476 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 STEAP3Q658P3 488 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 ZNF57Q68EA5 555 aaPredicted RBP10.28□□□□□ -0.76
PDPN-210ENST00000513143 CYB5R2Q6BCY4 276 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 OVCH2Q7RTZ1 564 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 OR52M1Q8NGK5 317 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 OR5H2Q8NGV7 314 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 IL1F10Q8WWZ1 152 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 TMEM186Q96B77 213 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 COX4I2Q96KJ9 171 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 SIRPDQ9H106 197 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 ABCB10Q9NRK6 738 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 JPT1Q9UK76 154 aa10.28□□□□□ -0.76
PDPN-210ENST00000513143 ZANQ9Y493 2812 aa10.27□□□□□ -0.77
PDPN-210ENST00000513143 ZNF469Q96JG9 3925 aaPredicted RBP10.27□□□□□ -0.77
PDPN-210ENST00000513143 OTOGQ6ZRI0 2925 aa10.27□□□□□ -0.77
PDPN-210ENST00000513143 A0A087X0M5 115 aa10.27□□□□□ -0.77
PDPN-210ENST00000513143 A0A1B0GX30 115 aa10.27□□□□□ -0.77
PDPN-210ENST00000513143 M0QYG6 137 aa10.27□□□□□ -0.77
PDPN-210ENST00000513143 SDCBPO00560 298 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms