RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 DIABLOQ9NR28 239 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 RAB20Q9NX57 234 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 C22orf24Q9Y442 160 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 RYR2Q92736 4967 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 UBR4Q5T4S7 5183 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CACNA1BQ00975 2339 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 PTPRJQ12913 1337 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 KIAA1109Q2LD37 5005 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 BRWD1Q9NSI6 2320 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ATRNO75882 1429 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 IGHV3OR15-7A0A075B7D8 119 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 TMSB15BA0A087X1C1 80 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 TRAV41A0A0B4J266 112 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 A0A1B0GXF2 115 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 C2orf74A8MZ97 194 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 H3BPC8 53 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 K7EN84 100 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF593O00488 134 aaPredicted RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 UBFD1O14562 309 aaKnown RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 CASQ2O14958 399 aaPredicted RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 GNRH2O43555 120 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 DENRO43583 198 aaKnown RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF737O75373 536 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ESDP10768 282 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 SLC2A1P11166 492 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 SPNP16150 400 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 CPN2P22792 545 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 IVDP26440 423 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ARR3P36575 388 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 CSKP41240 450 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 AKR1C2P52895 323 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 MP68P56378 58 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 GABARAPL2P60520 117 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 TMEM258P61165 79 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 RHOAP61586 193 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 SLC35A2P78381 396 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF90Q03938 601 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 RELAQ04206 551 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 STX4Q12846 297 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 IL18Q14116 193 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 RAB11BQ15907 218 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 MAPK14Q16539 360 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 TAL2Q16559 108 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 HSP90B2PQ58FF3 399 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 RASL11AQ6T310 242 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 UNQ6190/PRO20217Q6UXQ8 127 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 SLC35D2Q76EJ3 337 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 MRPL21Q7Z2W9 205 aaKnown RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 FAM19A3Q7Z5A8 133 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 GID4Q8IVV7 300 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 CA13Q8N1Q1 262 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 COMMD1Q8N668 190 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ASCC1Q8N9N2 400 aaKnown RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 FBXO36Q8NEA4 188 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 OR51Q1Q8NH59 317 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 SUN5Q8TC36 379 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 DOK4Q8TEW6 326 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 GTF2H4Q92759 462 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 FAM131CQ96AQ9 280 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 EBNA1BP2Q99848 306 aaKnown RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 UTP23Q9BRU9 249 aaKnown RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF426Q9BUY5 554 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 TM6SF2Q9BZW4 377 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 NXF2Q9GZY0 626 aaKnown RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 IQCGQ9H095 443 aaKnown RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 C16orf95Q9H693 158 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 EXO5Q9H790 373 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ACOT13Q9NPJ3 140 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 C8orf4Q9NR00 106 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 CHRAC1Q9NRG0 131 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 IFNKQ9P0W0 207 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 PRO2289Q9P1D8 64 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 TBL2Q9Y4P3 447 aaKnown RBP0.08□□□□□ -2.4
PDGFC-208ENST00000512711 KPTNQ9Y664 436 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 HEATR5BQ9P2D3 2071 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 SCN9AQ15858 1988 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 ATAD5Q96QE3 1844 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 KDM5BQ9UGL1 1544 aa0.08□□□□□ -2.4
PDGFC-208ENST00000512711 TNIKQ9UKE5 1360 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 MED12LQ86YW9 2145 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 PTPRBP23467 1997 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 MDFIC2A0A1B0GVS7 189 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 SERTM2A0A1B0GWG4 89 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 ANKRD20A5PA0PJZ0 165 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 NCF1BA6NI72 391 aaPredicted RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CCDC169A6NNP5 214 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF705FA8MVS1 300 aaPredicted RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 NCF1CA8MVU1 366 aaPredicted RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 I3L4J1 428 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 J3QLI3 93 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 PRMT5O14744 637 aaPredicted RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 FGF16O43320 207 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 GATCO43716 136 aaKnown RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 PDCD6O75340 191 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 PGLYRP1O75594 196 aaPredicted RBP0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CDK14O94921 469 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 LTAP01374 205 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 GIMD1P0DJR0 217 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 CTSEP14091 401 aa0.07□□□□□ -2.4
PDGFC-208ENST00000512711 GPX2P18283 190 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms