RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 HSF4Q9ULV5 492 aa9.45□□□□□ -0.9
HMGXB3-203ENST00000510472 STUB1Q9UNE7 303 aa9.45□□□□□ -0.9
HMGXB3-203ENST00000510472 TCF19Q9Y242 345 aa9.45□□□□□ -0.9
HMGXB3-203ENST00000510472 TRIM64CA6NLI5 447 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 FAM90A9PA6NNJ1 464 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 OOSP1A8MZH6 123 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 TOR1AO14656 332 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 PDCD5O14737 125 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 SOCS1O15524 211 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 RRP9O43818 475 aaKnown RBP9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 NAPSAO96009 420 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 BLVRBP30043 206 aaPredicted RBP9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 KIR2DS4P43632 304 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 PROK1P58294 105 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 FAM189A2Q15884 450 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 LY6EQ16553 131 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 Q3ZCU0 254 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 TPTE2P1Q5T6R2 138 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 OLFML2AQ68BL7 652 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 DHRS7BQ6IAN0 325 aaPredicted RBP9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 ZNF880Q6PDB4 577 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 SHISA2Q6UWI4 295 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 OR4K15Q8NH41 348 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 OR51E2Q9H255 320 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 GFOD1Q9NXC2 390 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 TRAPPC2LQ9UL33 140 aa9.44□□□□□ -0.9
HMGXB3-203ENST00000510472 TRBV6-6A0A0A6YYG2 114 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 TMEM272A0A1B0GTI8 110 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 IGHV3-7P01780 117 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 HBZP02008 142 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 RAB3BP20337 219 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 CEACAM3P40198 252 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 RANBP1P43487 201 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 LTC4SQ16873 150 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 TMEM30BQ3MIR4 351 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 PLA1AQ53H76 456 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 FBLN7Q53RD9 439 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 PLAC9Q5JTB6 97 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 NKAPLQ5M9Q1 402 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 C6orf183Q5T699 404 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 HES5Q5TA89 166 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 C5orf24Q7Z6I8 188 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 TPRA1Q86W33 373 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 Q8N2B8 174 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 ZNF439Q8NDP4 499 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 TSPAN14Q8NG11 270 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 OR1L1Q8NH94 360 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 UBALD1Q8TB05 177 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 WFDC12Q8WWY7 111 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 ST6GALNAC6Q969X2 333 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 URM1Q9BTM9 101 aaKnown RBP9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 ZNF696Q9H7X3 374 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 TAF9BQ9HBM6 251 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 RAB18Q9NP72 206 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 RAB22AQ9UL26 194 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 SSR3Q9UNL2 185 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 KCNK7Q9Y2U2 307 aa9.43□□□□□ -0.9
HMGXB3-203ENST00000510472 A0A087WXM4 84 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 SDCBPO00560 298 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 SPINT2O43291 252 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 TNFAIP8O95379 198 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 MYL9P24844 172 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 ZNF134P52741 427 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 EFNB2P52799 333 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 DIAPH2-AS1Q14236 149 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 HMGN3Q15651 99 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 NEDD8Q15843 81 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 CT45A1Q5HYN5 189 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 STEAP3Q658P3 488 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 TRAT1Q6PIZ9 186 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 THNSL2Q86YJ6 484 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 CT45A3Q8NHU0 189 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 PTX4Q96A99 478 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 CITED1Q99966 193 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 OCSTAMPQ9BR26 566 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 RANBP3Q9H6Z4 567 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 ABCB10Q9NRK6 738 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 PLEKHJ1Q9NW61 149 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 PITPNC1Q9UKF7 332 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 RNF114Q9Y508 228 aa9.42□□□□□ -0.9
HMGXB3-203ENST00000510472 A0A0B4J203 849 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 A0A1W2PPE3 182 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 A0A1W2PPI3 338 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 NOTOA8MTQ0 251 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 RAB27BO00194 218 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 SLC31A2O15432 143 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 SLC2A2P11168 524 aaPredicted RBP9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 CD36P16671 472 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 RAB6AP20340 208 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 GADD45AP24522 165 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 CD24P25063 80 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 BRS3P32247 399 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 VEGFCP49767 419 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 ZNF137PP52743 207 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 HTD2P86397 168 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 MADCAM1Q13477 382 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 HABP2Q14520 560 aaPredicted RBP9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 LY6G6FQ5SQ64 297 aa9.41□□□□□ -0.9
HMGXB3-203ENST00000510472 CCDC144NLQ6NUI1 221 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms