RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SPACA1Q9HBV2 294 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 MRPS28Q9Y2Q9 187 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 PNMA8CA0A1B0GUJ8 204 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 A0A1W2PPK0 400 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 LINC01548A6NM66 108 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 AIPO00170 330 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 SLC31A2O15432 143 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 HOXD3P31249 432 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 THBS3P49746 956 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 ZNF137PP52743 207 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 ST3GAL4Q11206 333 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 GPR176Q14439 515 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 Q3ZCU0 254 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 GLIPR1L1Q6UWM5 242 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 SLC25A48Q6ZT89 311 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 C8orf86Q6ZUL3 223 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 MOB3BQ86TA1 216 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 STPG2Q8N412 459 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 JAGN1Q8N5M9 183 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 PACRGLQ8N7B6 248 aa10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 MRPS24Q96EL2 167 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 CHCHD3Q9NX63 227 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-205ENST00000508319 WI2-2373I1.2A0A1W2PRP0 233 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 SC5DO75845 299 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 GNAO1P09471 354 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 SLC6A1P30531 599 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 GPR12P47775 334 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 TAS2R43P59537 309 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 MED21Q13503 144 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 SYT6Q5T7P8 510 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 AWAT2Q6E213 333 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 RAB12Q6IQ22 244 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 FOXRED2Q8IWF2 684 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 STX19Q8N4C7 294 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 DHRSXQ8N5I4 330 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 Q8N9W7 124 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 KLHL30-AS1Q8NEE0 82 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 OR2T10Q8NGZ9 312 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 RBMXL1Q96E39 390 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 DERL3Q96Q80 235 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 P2RX4Q99571 388 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 ABCG5Q9H222 651 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 C8orf4Q9NR00 106 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 PLSCR3Q9NRY6 295 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 LIN7CQ9NUP9 197 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 ETAA1Q9NY74 926 aa10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 CNOT2Q9NZN8 540 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-205ENST00000508319 TENM3Q9P273 2699 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 NBEAL2Q6ZNJ1 2754 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 EFCAB10A6NFE3 127 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 NCBP2LA6PVI3 153 aaKnown RBP10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 NUDT19A8MXV4 375 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 ZNF736B4DX44 427 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 MCRIP1C9JLW8 97 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 AP4M1O00189 453 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 SPINT2O43291 252 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 TXNL1O43396 289 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 HBZP02008 142 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 MAS1P04201 325 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 MGMTP16455 207 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 IL3RAP26951 378 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 CD1BP29016 333 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 ZNF134P52741 427 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 SLC35B1P78383 322 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 TMEM30BQ3MIR4 351 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 C6orf183Q5T699 404 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 SIGIRRQ6IA17 410 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 AHSA2Q719I0 299 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 CDH26Q8IXH8 852 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 PRR18Q8N4B5 295 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 FAM71E2Q8N5Q1 922 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 COMMD1Q8N668 190 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 OR10V1Q8NGI7 309 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 OR4K15Q8NH41 348 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 OR1L1Q8NH94 360 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 FBLIM1Q8WUP2 373 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 Q96M66 194 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 SELENOIQ9C0D9 397 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 BANF2Q9H503 90 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 ZFP57Q9NU63 452 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 GNG12Q9UBI6 72 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 TRAPPC2LQ9UL33 140 aa10.23□□□□□ -0.77
HMGCS1-205ENST00000508319 FAM90A10PA6NDY2 464 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 FAM90A7PA6NKC0 464 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 FAM90A23PA8MXZ1 464 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 CRTAPO75718 401 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 MOSP00540 346 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 CD1AP06126 327 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 RCC1P18754 421 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 CELP19835 753 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 CAPGP40121 348 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 VHLP40337 213 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 WNT4P56705 351 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 CFHR3Q02985 330 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 RCN1Q15293 331 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 CT45A1Q5HYN5 189 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 TRAT1Q6PIZ9 186 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 ZNF695Q8IW36 515 aa10.22□□□□□ -0.77
HMGCS1-205ENST00000508319 C8orf59Q8N0T1 100 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms