RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FAM3AP98173 230 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 DEFA6Q01524 100 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 FOXF1Q12946 379 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 PMS2P3Q13401 168 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 PAFAH1B3Q15102 231 aaKnown RBP1.46□□□□□ -2.18
LSM6-205ENST00000507449 PDGFRLQ15198 375 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 OR8G1Q15617 311 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 NIPAL1Q6NVV3 410 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 EBLN2Q6P2I7 272 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 MTERF4Q7Z6M4 381 aaKnown RBP1.46□□□□□ -2.18
LSM6-205ENST00000507449 ZFAND2AQ8N6M9 145 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 ANGPTL6Q8NI99 470 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 DTD1Q8TEA8 209 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 HIST1H2BAQ96A08 127 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 C20orf166-AS1Q96NR2 134 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 MED10Q9BTT4 135 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 BBS2Q9BXC9 721 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 ASCL3Q9NQ33 180 aa1.46□□□□□ -2.18
LSM6-205ENST00000507449 C17orf98A8MV24 154 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 J3QRE1 110 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 SLC25A20O43772 301 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 UGT2B11O75310 529 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 ASS1P00966 412 aaKnown RBP1.45□□□□□ -2.18
LSM6-205ENST00000507449 CTSEP14091 401 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 ATF1P18846 271 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 ACTR1BP42025 376 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 STC1P52823 247 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 RAB8AP61006 207 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 ANGPT1Q15389 498 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 CENPWQ5EE01 88 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 HENMT1Q5T8I9 393 aaKnown RBP1.45□□□□□ -2.18
LSM6-205ENST00000507449 SPNS3Q6ZMD2 512 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 Q6ZRU5 148 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 OR10P1Q8NGE3 313 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 OR4P4Q8NGL7 312 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 CD200R1Q8TD46 325 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 CHST5Q9GZS9 411 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 C11orf49Q9H6J7 331 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 SPACA1Q9HBV2 294 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 MRPL16Q9NX20 251 aaKnown RBP1.45□□□□□ -2.18
LSM6-205ENST00000507449 SHANK3Q9BYB0 1731 aa1.45□□□□□ -2.18
LSM6-205ENST00000507449 TRPC5OSA6NMA1 111 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 C9J4A7 227 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 G3V3Q6 166 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 PHYHO14832 338 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 DLX6P56179 175 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 PSG4Q00888 419 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 BSPH1Q075Z2 132 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 TSPAN31Q12999 210 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 CST6Q15828 149 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 TMPPEQ6ZT21 453 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 TCF24Q7RTU0 167 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 DOLPP1Q86YN1 238 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 BLIDQ8IZY5 108 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 MFSD8Q8NHS3 518 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 GALMQ96C23 342 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 COMMD9Q9P000 198 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 VPREB3Q9UKI3 123 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 LRPPRCP42704 1394 aaKnown RBP1.44□□□□□ -2.18
LSM6-205ENST00000507449 TMEM94Q12767 1356 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 COL18A1P39060 1754 aa1.44□□□□□ -2.18
LSM6-205ENST00000507449 DNMT1P26358 1616 aaKnown RBP1.44□□□□□ -2.18
LSM6-205ENST00000507449 NUP153P49790 1475 aaKnown RBP1.43□□□□□ -2.18
LSM6-205ENST00000507449 CLUHO75153 1309 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 MAP3K19Q56UN5 1328 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 LOC102725191A0A1B0GVB3 256 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 ERICH2A1L162 156 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 IGSF23A1L1A6 192 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 ZNF878C9JN71 531 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 ADAP1O75689 374 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 RAB36O95755 333 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 GABRA3P34903 492 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 RCVRNP35243 200 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 SULT1A2P50226 295 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 GTF2BQ00403 316 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 ZNHIT3Q15649 155 aaPredicted RBP1.43□□□□□ -2.18
LSM6-205ENST00000507449 ZNF181Q2M3W8 571 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 FAM229BQ4G0N7 80 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 CLEC6AQ6EIG7 209 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 TMEM75Q8N9X5 138 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 OR2V1Q8NHB1 315 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 TAMM41Q96BW9 452 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 ATP6V1G3Q96LB4 118 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 UGT2B28Q9BY64 529 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 GTSF1LQ9H1H1 148 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 C1orf109Q9NX04 203 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 ZNF337Q9Y3M9 751 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 HSPE1-MOB4S4R3N1 261 aa1.43□□□□□ -2.18
LSM6-205ENST00000507449 CEP170Q5SW79 1584 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 FBN1P35555 2871 aaKnown RBP1.42□□□□□ -2.18
LSM6-205ENST00000507449 B4DEV8 164 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 F5H5K5 113 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 KLRC4-KLRK1H3BQV0 150 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 GADD45AP24522 165 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 PSMA1P25786 263 aaKnown RBP1.42□□□□□ -2.18
LSM6-205ENST00000507449 CRABP1P29762 137 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 GABARAPL2P60520 117 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 TRMT12Q53H54 448 aaKnown RBP1.42□□□□□ -2.18
LSM6-205ENST00000507449 CRLF3Q8IUI8 442 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms