RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TMEM239Q8WW34 195 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 PPWD1Q96BP3 646 aaKnown RBP0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 LRRC39Q96DD0 335 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 REEP6Q96HR9 211 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 CATSPER2Q96P56 530 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 RAB1BQ9H0U4 201 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 COMMD9Q9P000 198 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 RPUSD1Q9UJJ7 312 aaKnown RBP0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 FBXL3Q9UKT7 428 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 STK38LQ9Y2H1 464 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 PHLDA3Q9Y5J5 127 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 PTPRKQ15262 1439 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 ADAMTSL1Q8N6G6 1762 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 A0A0G2JQZ4 141 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 LOC102725191A0A1B0GVB3 256 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 A0A1B0GW15 77 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 SIGLEC16A6NMB1 481 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 A8MWP6 167 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 BOLA2-SMG1P6H3BVE0 249 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 TOR1AO14656 332 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 FGF16O43320 207 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 SLC25A20O43772 301 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 SNAP29O95721 258 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 LDOC1O95751 146 aaPredicted RBP0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 FBP1P09467 338 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR4A8P0C604 315 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 NQO2P16083 231 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZNF3P17036 446 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 ATF1P18846 271 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 TSPOP30536 169 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 EVI2BP34910 448 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 RCVRNP35243 200 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 C1QTNF8P60827 252 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 CD164Q04900 197 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 APOFQ13790 326 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 FLOT2Q14254 428 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 BSXQ3C1V8 233 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 FBXO48Q5FWF7 155 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 CLEC20AQ6ZU45 233 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 CCDC121Q6ZUS5 278 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 SSX7Q7RTT5 188 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZBTB8OSQ8IWT0 167 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 MUC15Q8N387 334 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 GATD1Q8NB37 220 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR2Y1Q8NGV0 311 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 FAM45AQ8TCE6 357 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 CD200R1Q8TD46 325 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 DCANP1Q8TF63 244 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 GALMQ96C23 342 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 SIKE1Q9BRV8 207 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 FAAP24Q9BTP7 215 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 TAPBPLQ9BX59 468 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 HINT2Q9BX68 163 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 EBPLQ9BY08 206 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 HAUS4Q9H6D7 363 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 CLEC2DQ9UHP7 191 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 PSORS1C2Q9UIG4 136 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 BTRCQ9Y297 605 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 FIS1Q9Y3D6 152 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 NOTCH1P46531 2555 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 CRB1P82279 1406 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 SCN9AQ15858 1988 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 ABCB11O95342 1321 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 USP42Q9H9J4 1324 aaKnown RBP0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 PXDNLA1KZ92 1463 aa0.61□□□□□ -2.31
HMGB1P29-201ENST00000505659 FN1P02751 2386 aaKnown RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 PTPRBP23467 1997 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 MYH11P35749 1972 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 A0A0J9YX75 114 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 B4DEV8 164 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 F8VP50 259 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 CDIPTO14735 213 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 PHYHO14832 338 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 SHOX2O60902 331 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 FADS2O95864 444 aaKnown RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 CST4P01036 141 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 IGKV5-2P06315 115 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 TPM1P09493 284 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 CPMP14384 443 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 NQO1P15559 274 aaKnown RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZNF7P17097 686 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 PSMA1P25786 263 aaKnown RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 ACTR1BP42025 376 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 MP68P56378 58 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 RAB2AP61019 212 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 UBE2KP61086 200 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 TSPAN31Q12999 210 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 SKP2Q13309 424 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 USF2Q15853 346 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 MAPK14Q16539 360 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 PSG3Q16557 428 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 Q6ZT83 130 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 AHSA2Q719I0 299 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 TCAIMQ8N3R3 496 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR2AE1Q8NHA4 323 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 MRAP2Q96G30 205 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 CAPZA3Q96KX2 299 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 PGLYRP3Q96LB9 341 aa0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 NAP1L5Q96NT1 182 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P29-201ENST00000505659 EBNA1BP2Q99848 306 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms