RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	SNRPG	P62308	76 aa	Known RBP	13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	GNB1	P62873	340 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	MRPL28	Q13084	256 aa	Known RBP	13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	LPCAT4	Q643R3	524 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	STEAP3	Q658P3	488 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	LINC00596	Q86U02	117 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	SYS1	Q8N2H4	156 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	CCDC107	Q8WV48	283 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	FAM192A	Q9GZU8	254 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	METTL9	Q9H1A3	318 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	OR51J1	Q9H342	316 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	GHITM	Q9H3K2	345 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	RAB9B	Q9NP90	201 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	ISYNA1	Q9NPH2	558 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	IL36G	Q9NZH8	169 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	ZNF581	Q9P0T4	197 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	ING4	Q9UNL4	249 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	WSB1	Q9Y6I7	421 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	DNAH7	Q8WXX0	4024 aa		13.61	□□□□□ -0.23
TMEM53-209	ENST00000495630	IGHV3-43	A0A0B4J1X8	118 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	SNTN	A6NMZ2	147 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	SAP30	O75446	220 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	CSTB	P04080	98 aa	Known RBP	13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	IGHV3-43D	P0DP04	118 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	FCGR1A	P12314	374 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	GP9	P14770	177 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	RBM11	P57052	281 aa	Known RBP	13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	TMEM30B	Q3MIR4	351 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	CT45A1	Q5HYN5	189 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	ZNF497	Q6ZNH5	498 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	LHFPL3	Q86UP9	236 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	ZNF439	Q8NDP4	499 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	CT45A3	Q8NHU0	189 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	UBALD1	Q8TB05	177 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	TSEN15	Q8WW01	171 aa	Known RBP	13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	OR5B12	Q96R08	314 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630	PDCD1LG2	Q9BQ51	273 aa		13.6	□□□□□ -0.23
TMEM53-209	ENST00000495630		G3V318	75 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	GEMIN2	O14893	280 aa	Known RBP	13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	SLC31A2	O15432	143 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	LANCL1	O43813	399 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	CDRT1	O95170	752 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	SLC2A2	P11168	524 aa	Predicted RBP	13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	ZNF134	P52741	427 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	MPV17L	Q2QL34	196 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	STX19	Q8N4C7	294 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	OR51A2	Q8NGJ7	313 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	OR6Q1	Q8NGQ2	317 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	DLX4	Q92988	240 aa	Predicted RBP	13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	LGALS12	Q96DT0	336 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	CENPN	Q96H22	339 aa	Predicted RBP	13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	ALG8	Q9BVK2	526 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	JAM3	Q9BX67	310 aa		13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	ISG20L2	Q9H9L3	353 aa	Known RBP	13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.59	□□□□□ -0.23
TMEM53-209	ENST00000495630	SACS	Q9NZJ4	4579 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	TRAV41	A0A0B4J266	112 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630		E9PI62	339 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	SPINT2	O43291	252 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	GBX2	P52951	348 aa	Predicted RBP	13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	GABPB1	Q06547	395 aa	Predicted RBP	13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	MMD	Q15546	238 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	ATAD3C	Q5T2N8	411 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	ZFAND6	Q6FIF0	208 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	ACSM6	Q6P461	480 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	MINDY2	Q8NBR6	621 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	RBMXL1	Q96E39	390 aa	Known RBP	13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	TM2D3	Q9BRN9	247 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	GNG12	Q9UBI6	72 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	OAZ3	Q9UMX2	235 aa		13.58	□□□□□ -0.24
TMEM53-209	ENST00000495630	MAGEA13P	A6NCF6	341 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	TRIM64C	A6NLI5	447 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	LINC01619	G3V211	115 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	AIP	O00170	330 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	LDLRAD4	O15165	306 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	ATP6V0E1	O15342	81 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	ZNF780A	O75290	641 aa	Predicted RBP	13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	HLA-DRB1	P01911	266 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	MYF6	P23409	242 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	LSAMP	Q13449	338 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	NEK7	Q8TDX7	302 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	S100A13	Q99584	98 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	TMEM138	Q9NPI0	162 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	TAS2R4	Q9NYW5	299 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	TRAPPC2L	Q9UL33	140 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	ERGIC3	Q9Y282	383 aa		13.57	□□□□□ -0.24
TMEM53-209	ENST00000495630	IGHV7-81	A0A0B4J1V7	117 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	C12orf77	C9JDV5	145 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	CD2	P06729	351 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	SOX2	P48431	317 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	ACTB	P60709	375 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	SYT6	Q5T7P8	510 aa	Predicted RBP	13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	LIN54	Q6MZP7	749 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	ISOC1	Q96CN7	298 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	ZNF251	Q9BRH9	671 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	TOLLIP	Q9H0E2	274 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	EDA2R	Q9HAV5	297 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	SPACA1	Q9HBV2	294 aa		13.56	□□□□□ -0.24
TMEM53-209	ENST00000495630	PARP11	Q9NR21	331 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms