RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 RRP9O43818 475 aaKnown RBP18.24■□□□□ 0.51
COL27A1-208ENST00000494780 ELANEP08246 267 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 IGHV3-43DP0DP04 118 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 GPR176Q14439 515 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 KIR2DS1Q14954 304 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 SLC22A6Q4U2R8 563 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 OR2G6Q5TZ20 316 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 RNF152Q8N8N0 203 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 SMIM19Q96E16 107 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 S1PR3Q99500 378 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 ZNF184Q99676 751 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-208ENST00000494780 SPACA1Q9HBV2 294 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 RAB9BQ9NP90 201 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 BABAM2Q9NXR7 383 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 SIRT4Q9Y6E7 314 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-208ENST00000494780 KMT2CQ8NEZ4 4911 aaKnown RBP18.23■□□□□ 0.51
COL27A1-208ENST00000494780 WBP4O75554 376 aaKnown RBP18.23■□□□□ 0.51
COL27A1-208ENST00000494780 GPX5O75715 221 aa18.23■□□□□ 0.51
COL27A1-208ENST00000494780 IGFBP3P17936 291 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-208ENST00000494780 CDX1P47902 265 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-208ENST00000494780 RAB25P57735 213 aa18.23■□□□□ 0.51
COL27A1-208ENST00000494780 SMN1Q16637 294 aaKnown RBP18.23■□□□□ 0.51
COL27A1-208ENST00000494780 TMEM30BQ3MIR4 351 aa18.23■□□□□ 0.51
COL27A1-208ENST00000494780 FAM53AQ6NSI3 398 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-208ENST00000494780 SLC25A48Q6ZT89 311 aaKnown RBP18.23■□□□□ 0.51
COL27A1-208ENST00000494780 TFAP2CQ92754 450 aa18.23■□□□□ 0.51
COL27A1-208ENST00000494780 ORAI1Q96D31 301 aa18.23■□□□□ 0.51
COL27A1-208ENST00000494780 DNAH9Q9NYC9 4486 aa18.22■□□□□ 0.51
COL27A1-208ENST00000494780 TRBV5-5A0A0J9YX44 114 aa18.22■□□□□ 0.51
COL27A1-208ENST00000494780 A0A1W2PP11 408 aa18.22■□□□□ 0.51
COL27A1-208ENST00000494780 IRGMA1A4Y4 181 aa18.22■□□□□ 0.51
COL27A1-208ENST00000494780 SPINT2O43291 252 aa18.22■□□□□ 0.51
COL27A1-208ENST00000494780 ZNF137PP52743 207 aa18.22■□□□□ 0.51
COL27A1-208ENST00000494780 OR5M8Q8NGP6 311 aa18.22■□□□□ 0.51
COL27A1-208ENST00000494780 RCC2Q9P258 522 aaKnown RBP18.22■□□□□ 0.51
COL27A1-208ENST00000494780 ZNF736B4DX44 427 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-208ENST00000494780 C12orf77C9JDV5 145 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 MCRIP1C9JLW8 97 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 SLC31A2O15432 143 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 NHLRC4P0CG21 123 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-208ENST00000494780 VSIG8P0DPA2 414 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 CFHR3Q02985 330 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 C9orf66Q5T8R8 295 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 LCNL1Q6ZST4 164 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 FAM71E2Q8N5Q1 922 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 ZNF439Q8NDP4 499 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 ZNF555Q8NEP9 628 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 OR13C5Q8NGS8 318 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 GHSRQ92847 366 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 MRPS24Q96EL2 167 aaKnown RBP18.21■□□□□ 0.51
COL27A1-208ENST00000494780 S100A14Q9HCY8 104 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 GNG12Q9UBI6 72 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 CKLFQ9UBR5 152 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 ZNF580Q9UK33 172 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 TRAPPC2LQ9UL33 140 aa18.21■□□□□ 0.51
COL27A1-208ENST00000494780 IGHG4P01861 327 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 MYL12AP19105 171 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 VDAC1P21796 283 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 SOX6P35712 828 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 DEFB136Q30KP8 78 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 Q499Y3 187 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 C6orf183Q5T699 404 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 SYT6Q5T7P8 510 aaPredicted RBP18.2■□□□□ 0.5
COL27A1-208ENST00000494780 PQLC1Q8N2U9 271 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 RDH12Q96NR8 316 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 HSPB9Q9BQS6 159 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 ETAA1Q9NY74 926 aa18.2■□□□□ 0.5
COL27A1-208ENST00000494780 DIMT1Q9UNQ2 313 aaKnown RBP18.2■□□□□ 0.5
COL27A1-208ENST00000494780 EXOSC1Q9Y3B2 195 aaKnown RBP18.2■□□□□ 0.5
COL27A1-208ENST00000494780 MAGEA13PA6NCF6 341 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 LALBAP00709 142 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 VHLP40337 213 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 LUMP51884 338 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-208ENST00000494780 ZNF134P52741 427 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 YIF1BQ5BJH7 314 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 CT45A1Q5HYN5 189 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 STEAP3Q658P3 488 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 DMKNQ6E0U4 476 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-208ENST00000494780 TRAT1Q6PIZ9 186 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 GAPTQ8N292 157 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 CT45A3Q8NHU0 189 aa18.19■□□□□ 0.5
COL27A1-208ENST00000494780 SMPD3Q9NY59 655 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-208ENST00000494780 MRPS28Q9Y2Q9 187 aaKnown RBP18.19■□□□□ 0.5
COL27A1-208ENST00000494780 HBZP02008 142 aa18.18■□□□□ 0.5
COL27A1-208ENST00000494780 IGF1P05019 195 aa18.18■□□□□ 0.5
COL27A1-208ENST00000494780 FSTP19883 344 aa18.18■□□□□ 0.5
COL27A1-208ENST00000494780 F2RL1P55085 397 aa18.18■□□□□ 0.5
COL27A1-208ENST00000494780 RAB12Q6IQ22 244 aa18.18■□□□□ 0.5
COL27A1-208ENST00000494780 GLIPR1L1Q6UWM5 242 aa18.18■□□□□ 0.5
COL27A1-208ENST00000494780 OR4K15Q8NH41 348 aa18.18■□□□□ 0.5
COL27A1-208ENST00000494780 C4orf3Q8WVX3 66 aa18.18■□□□□ 0.5
COL27A1-208ENST00000494780 MUL1Q969V5 352 aa18.18■□□□□ 0.5
COL27A1-208ENST00000494780 LSM4Q9Y4Z0 139 aaKnown RBP18.18■□□□□ 0.5
COL27A1-208ENST00000494780 TRAV8-7A0A075B6U6 113 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 LANCL1O43813 399 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 CA11O75493 328 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 OR5H8P0DN80 308 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 RPS11P62280 158 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL27A1-208ENST00000494780 MED21Q13503 144 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 JAGN1Q8N5M9 183 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms