RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 Q8NFD4 153 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 GPR148Q8TDV2 347 aa9.89□□□□□ -0.83
SKA1-205ENST00000494518 LSM4Q9Y4Z0 139 aaKnown RBP9.89□□□□□ -0.83
SKA1-205ENST00000494518 MAGEA13PA6NCF6 341 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 C12orf77C9JDV5 145 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 AIPO00170 330 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 RRP9O43818 475 aaKnown RBP9.88□□□□□ -0.83
SKA1-205ENST00000494518 ATP5HO75947 161 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 LY86O95711 162 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 MOSP00540 346 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 CD2P06729 351 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 LIMS3P0CW19 117 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 LIMS4P0CW20 117 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 GZMHP20718 246 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 VDAC1P21796 283 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 PPP3R1P63098 170 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 RAB40BQ12829 278 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 MRPL28Q13084 256 aaKnown RBP9.88□□□□□ -0.83
SKA1-205ENST00000494518 KIR2DS1Q14954 304 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 SMN1Q16637 294 aaKnown RBP9.88□□□□□ -0.83
SKA1-205ENST00000494518 ZNF260Q3ZCT1 412 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 OR2G6Q5TZ20 316 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 C5orf24Q7Z6I8 188 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 LINC00311Q8N616 119 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 OR4K15Q8NH41 348 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 OR1L1Q8NH94 360 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 RHOXF1Q8NHV9 184 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 APH1BQ8WW43 257 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 ST6GALNAC6Q969X2 333 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 Q96MT0 163 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 OR5B12Q96R08 314 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 MYCBPQ99417 103 aaPredicted RBP9.88□□□□□ -0.83
SKA1-205ENST00000494518 S100A13Q99584 98 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 GNG12Q9UBI6 72 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 ZMAT5Q9UDW3 170 aaKnown RBP9.88□□□□□ -0.83
SKA1-205ENST00000494518 SCOCQ9UIL1 159 aa9.88□□□□□ -0.83
SKA1-205ENST00000494518 SIRT4Q9Y6E7 314 aaPredicted RBP9.88□□□□□ -0.83
SKA1-205ENST00000494518 MT-ND4P03905 459 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 ELANEP08246 267 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 NHLRC4P0CG21 123 aaPredicted RBP9.87□□□□□ -0.83
SKA1-205ENST00000494518 CD1BP29016 333 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 BDKRB2P30411 391 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 SOX6P35712 828 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 CDX1P47902 265 aaPredicted RBP9.87□□□□□ -0.83
SKA1-205ENST00000494518 ETV1P50549 477 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 ZNF134P52741 427 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 GP2P55259 537 aaKnown RBP9.87□□□□□ -0.83
SKA1-205ENST00000494518 CFHR3Q02985 330 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 NHLRC3Q5JS37 347 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 SYT6Q5T7P8 510 aaPredicted RBP9.87□□□□□ -0.83
SKA1-205ENST00000494518 ZNF497Q6ZNH5 498 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 ZFP41Q8N8Y5 198 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 OR11H1Q8NG94 326 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 OR52M1Q8NGK5 317 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 KCTD7Q96MP8 289 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 ZNF184Q99676 751 aaPredicted RBP9.87□□□□□ -0.83
SKA1-205ENST00000494518 SLC29A1Q99808 456 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 GON7Q9BXV9 100 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 IFT22Q9H7X7 185 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 GNB4Q9HAV0 340 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 TMEM138Q9NPI0 162 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 IL36GQ9NZH8 169 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 WSB1Q9Y6I7 421 aa9.87□□□□□ -0.83
SKA1-205ENST00000494518 TENM2Q9NT68 2774 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 LOC100130705A0A1B0GUX0 176 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 A0A1W2PPK0 400 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 IGHG4P01861 327 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 CNTFRP26992 372 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 MPV17LQ2QL34 196 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 CT45A1Q5HYN5 189 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 RPL22L1Q6P5R6 122 aaKnown RBP9.86□□□□□ -0.83
SKA1-205ENST00000494518 SLC25A48Q6ZT89 311 aaKnown RBP9.86□□□□□ -0.83
SKA1-205ENST00000494518 STX19Q8N4C7 294 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 FAM71E2Q8N5Q1 922 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 RNF152Q8N8N0 203 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 ZNF439Q8NDP4 499 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 CT45A3Q8NHU0 189 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 C4orf3Q8WVX3 66 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 MUL1Q969V5 352 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 KLK15Q9H2R5 256 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 ETAA1Q9NY74 926 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 FAM53CQ9NYF3 392 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 ZNF107Q9UII5 783 aaPredicted RBP9.86□□□□□ -0.83
SKA1-205ENST00000494518 TRAPPC2LQ9UL33 140 aa9.86□□□□□ -0.83
SKA1-205ENST00000494518 RPL36Q9Y3U8 105 aaKnown RBP9.86□□□□□ -0.83
SKA1-205ENST00000494518 TRAV8-7A0A075B6U6 113 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 G3V318 75 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 DYNC1I1O14576 645 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 ORC5O43913 435 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 LALBAP00709 142 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 HBZP02008 142 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 GTF2F2P13984 249 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 RCC1P18754 421 aaPredicted RBP9.85□□□□□ -0.83
SKA1-205ENST00000494518 PSMB8P28062 276 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 VHLP40337 213 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 GNB1P62873 340 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 ADARB1P78563 741 aaKnown RBP9.85□□□□□ -0.83
SKA1-205ENST00000494518 RIPK1Q13546 671 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 FHL3Q13643 280 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 GNMTQ14749 295 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms