RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 SERPINA2P20848 420 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 GABRR1P24046 479 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 GADD45AP24522 165 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 CHATP28329 748 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 GLIPR1P48060 266 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 TMEM50BP56557 158 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 LINC00310P59036 64 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 HILS1P60008 231 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 RPS16P62249 146 aaKnown RBP5.47□□□□□ -1.53
VPS52-219ENST00000493379 AESQ08117 197 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 BLMHQ13867 455 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 RBM39Q14498 530 aaKnown RBP5.47□□□□□ -1.53
VPS52-219ENST00000493379 HABP2Q14520 560 aaPredicted RBP5.47□□□□□ -1.53
VPS52-219ENST00000493379 NEDD8Q15843 81 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 FAM189A2Q15884 450 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 TAF9Q16594 264 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 AANATQ16613 207 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 C17orf58Q2M2W7 97 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 Q3ZCU0 254 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 LY6G6FQ5SQ64 297 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 NCR3LG1Q68D85 454 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 AWAT2Q6E213 333 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 Q6YL49 198 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ZNF497Q6ZNH5 498 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 VMO1Q7Z5L0 202 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ANKRD13BQ86YJ7 626 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 C1QL4Q86Z23 238 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ZNF565Q8N9K5 539 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 SUMF2Q8NBJ7 301 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 OR51D1Q8NGF3 324 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 OR52M1Q8NGK5 317 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 PLPPR1Q8TBJ4 325 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ZNF596Q8TC21 504 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 KCTD7Q96MP8 289 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 NKX3-1Q99801 234 aaPredicted RBP5.47□□□□□ -1.53
VPS52-219ENST00000493379 CENPOQ9BU64 300 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 DPCDQ9BVM2 203 aaPredicted RBP5.47□□□□□ -1.53
VPS52-219ENST00000493379 HEXA-AS1Q9H8Q6 139 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ELL3Q9HB65 397 aaPredicted RBP5.47□□□□□ -1.53
VPS52-219ENST00000493379 VCX3AQ9NNX9 186 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 OR6C3Q9NZP0 311 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 FAM30AQ9NZY2 134 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ZNF581Q9P0T4 197 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 RAB22AQ9UL26 194 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 DNAH1Q9P2D7 4330 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 A0A0A6YYD4 124 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 VGLL3A8MV65 326 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 ODF3BA8MYP8 253 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 B5MCH6 92 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 C15orf65H3BRN8 121 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 RAB27BO00194 218 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 SIRPB1O00241 398 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 MMP23AO75900 390 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 OR7C1O76099 320 aaPredicted RBP5.46□□□□□ -1.54
VPS52-219ENST00000493379 NAPSAO96009 420 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 IL1AP01583 271 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 IGLV1-47P01700 117 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 CCL3L1P16619 93 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 MYL9P24844 172 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 SDC2P34741 201 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 SRP14P37108 136 aaKnown RBP5.46□□□□□ -1.54
VPS52-219ENST00000493379 OR10A3P58181 314 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 DYNC1I2Q13409 638 aaKnown RBP5.46□□□□□ -1.54
VPS52-219ENST00000493379 RAB11BQ15907 218 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 CTF1Q16619 201 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 SRSF7Q16629 238 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS52-219ENST00000493379 PAN3Q58A45 887 aaKnown RBP5.46□□□□□ -1.54
VPS52-219ENST00000493379 KRBOX4Q5JUW0 171 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 GPR157Q5UAW9 335 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 ZNF626Q68DY1 528 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 OR52W1Q6IF63 320 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 ZNF880Q6PDB4 577 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 RTN4RL2Q86UN3 420 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 CROCCP3Q8IVE0 287 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 BPIFB2Q8N4F0 458 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 TMEM86BQ8N661 226 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 C8orf31Q8N9H6 132 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 OR4M1Q8NGD0 313 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 H1FXQ92522 213 aaKnown RBP5.46□□□□□ -1.54
VPS52-219ENST00000493379 ZNF48Q96MX3 618 aaPredicted RBP5.46□□□□□ -1.54
VPS52-219ENST00000493379 ZNF714Q96N38 554 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 PCGF1Q9BSM1 259 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 FUNDC2Q9BWH2 189 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 TMEM59Q9BXS4 323 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 MRPS26Q9BYN8 205 aaKnown RBP5.46□□□□□ -1.54
VPS52-219ENST00000493379 SELENOIQ9C0D9 397 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 FAM192AQ9GZU8 254 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 CHST6Q9GZX3 395 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 PPA2Q9H2U2 334 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 RIMS4Q9H426 269 aaPredicted RBP5.46□□□□□ -1.54
VPS52-219ENST00000493379 BANF2Q9H503 90 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 GAR1Q9NY12 217 aaKnown RBP5.46□□□□□ -1.54
VPS52-219ENST00000493379 KCNK7Q9Y2U2 307 aa5.46□□□□□ -1.54
VPS52-219ENST00000493379 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 DSCAML1Q8TD84 2053 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 TRGV10A0A0A0MS01 117 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 TRAV40A0A0B4J280 105 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 TMEM272A0A1B0GTI8 110 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 A0A1W2PQ09 198 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 A0A1W2PRX2 142 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms