RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PTBP1P26599 531 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■■■■□ 19.4
TTC28-207ENST00000490475 VDAC2P45880 294 aaPredicted RBP8.34□□□□□ -1.07
TTC28-207ENST00000490475 ATXN7L3Q14CW9 347 aaPredicted RBP8.34□□□□□ -1.07
TTC28-207ENST00000490475 TRAM1Q15629 374 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 AWAT2Q6E213 333 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 CCDC144NLQ6NUI1 221 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 TCF23Q7RTU1 214 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 TRAPPC6BQ86SZ2 158 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 C1QL4Q86Z23 238 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 CHST4Q8NCG5 386 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 TMEM104Q8NE00 496 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 PHYHIPQ92561 330 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 GFI1Q99684 422 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 UQCC2Q9BRT2 126 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 BANF2Q9H503 90 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 SERTAD4Q9NUC0 356 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 TAS2R3Q9NYW6 316 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 DPM3Q9P2X0 92 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 AK6Q9Y3D8 172 aaKnown RBP8.34□□□□□ -1.07
TTC28-207ENST00000490475 KIAA2026Q5HYC2 2103 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 FAM172BPA6NC97 362 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 FAM90A22PA8MWA6 464 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 OOSP1A8MZH6 123 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 ZNF780AO75290 641 aaPredicted RBP8.33□□□□□ -1.08
TTC28-207ENST00000490475 CRTAPO75718 401 aaPredicted RBP8.33□□□□□ -1.08
TTC28-207ENST00000490475 OR7C1O76099 320 aaPredicted RBP8.33□□□□□ -1.08
TTC28-207ENST00000490475 CD37P11049 281 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 GTF2F2P13984 249 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 PSMA1P25786 263 aaKnown RBP8.33□□□□□ -1.08
TTC28-207ENST00000490475 P2RX3P56373 397 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 RBM11P57052 281 aaKnown RBP8.33□□□□□ -1.08
TTC28-207ENST00000490475 GPR176Q14439 515 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 IL13RA2Q14627 380 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 PAN3Q58A45 887 aaKnown RBP8.33□□□□□ -1.08
TTC28-207ENST00000490475 NHLRC3Q5JS37 347 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 KRBOX4Q5JUW0 171 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 C1orf100Q5SVJ3 147 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 STEAP3Q658P3 488 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 GLT8D1Q68CQ7 371 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 OR10K2Q6IF99 312 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 HEPN1Q6WQI6 88 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 NKAIN3Q8N8D7 197 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 C11orf44Q8N8P7 122 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 POC5Q8NA72 575 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 SUMF2Q8NBJ7 301 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 R3HDM4Q96D70 268 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 COQ2Q96H96 371 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 SELENOIQ9C0D9 397 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 WNT10AQ9GZT5 417 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 LIN7BQ9HAP6 207 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 PCDHB16Q9NRJ7 776 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 NDUFB11Q9NX14 153 aa8.33□□□□□ -1.08
TTC28-207ENST00000490475 TRAV39A0A0B4J263 110 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 TRDV1A0A1B0GX56 115 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 LEUTXA8MZ59 168 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 G3V4G9 280 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 MMP23AO75900 390 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 ARL6IP5O75915 188 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 DUS4LO95620 317 aaKnown RBP8.32□□□□□ -1.08
TTC28-207ENST00000490475 IL1AP01583 271 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 CSN2P05814 226 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 MGMTP16455 207 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 GALP22466 123 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 MNDAP41218 407 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 RORCP51449 518 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 PRRX1P54821 245 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 LSM3P62310 102 aaKnown RBP8.32□□□□□ -1.08
TTC28-207ENST00000490475 NSUN5P1Q3KNT7 163 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 PLA1AQ53H76 456 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 ATAD3CQ5T2N8 411 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 CD200R1LQ6Q8B3 271 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 CCBE1Q6UXH8 406 aaPredicted RBP8.32□□□□□ -1.08
TTC28-207ENST00000490475 TMEM219Q86XT9 240 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 ABHD12Q8N2K0 398 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 PLPPR1Q8TBJ4 325 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 AP3S1Q92572 193 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 CORO2AQ92828 525 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 FAM46BQ96A09 425 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 CYYR1Q96J86 154 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 DPCDQ9BVM2 203 aaPredicted RBP8.32□□□□□ -1.08
TTC28-207ENST00000490475 BARHL1Q9BZE3 327 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 GPR61Q9BZJ8 451 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 C6orf62Q9GZU0 229 aaPredicted RBP8.32□□□□□ -1.08
TTC28-207ENST00000490475 KCNK15Q9H427 330 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 NECAP2Q9NVZ3 263 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 OR6C3Q9NZP0 311 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 HILPDAQ9Y5L2 63 aa8.32□□□□□ -1.08
TTC28-207ENST00000490475 MEIKINA0A087WXM9 373 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 SHISA3A0PJX4 238 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 ODAMA1E959 279 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 TOR1AO14656 332 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 CD33P20138 364 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 PAX6P26367 422 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 HTR2CP28335 458 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 CD34P28906 385 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 RAB13P51153 203 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 LOXL3P58215 753 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 P2RY14Q15391 338 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 C22orf42Q6IC83 251 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms