RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 CNTFRP26992 372 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 ECI1P42126 302 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 KCNJ3P48549 501 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 PPP3R1P63098 170 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 ADARB1P78563 741 aaKnown RBP12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 CT45A1Q5HYN5 189 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 SYT6Q5T7P8 510 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 ZNF497Q6ZNH5 498 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 SLC16A12Q6ZSM3 486 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 IZUMO1Q8IYV9 350 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 CT45A3Q8NHU0 189 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 WWC2-AS2Q96NR7 200 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 RASL11BQ9BPW5 248 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 MCRIP2Q9BUT9 160 aaKnown RBP12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 C9orf16Q9BUW7 83 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 FGF20Q9NP95 211 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 WSB1Q9Y6I7 421 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 UBE2QL1A1L167 161 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 MPZL2O60487 215 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 BAG2O95816 211 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 MOSP00540 346 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 PAX5Q02548 391 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 MRPL28Q13084 256 aaKnown RBP12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 DOC2BQ14184 412 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 GNMTQ14749 295 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 CXorf66Q5JRM2 361 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 NKAPLQ5M9Q1 402 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 ZFP1Q6P2D0 407 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 GLIPR1L1Q6UWM5 242 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 LINC00311Q8N616 119 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 ZNF439Q8NDP4 499 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 GHSRQ92847 366 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 CPNE2Q96FN4 548 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 GPR61Q9BZJ8 451 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 KLK15Q9H2R5 256 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 IFT22Q9H7X7 185 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 S100A14Q9HCY8 104 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 LIN7CQ9NUP9 197 aaKnown RBP12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 ETAA1Q9NY74 926 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 IL36GQ9NZH8 169 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 GNG12Q9UBI6 72 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 TRAPPC2LQ9UL33 140 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 TENM3Q9P273 2699 aa12.43□□□□□ -0.42
ERGIC3-217ENST00000488935 SEC14L6B5MCN3 397 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 G3V318 75 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 OGG1O15527 345 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 HBZP02008 142 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 MAS1P04201 325 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 IGFBP3P17936 291 aaPredicted RBP12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 CD1BP29016 333 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 RPS11P62280 158 aaKnown RBP eCLIP12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 RIPK1Q13546 671 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 NHLRC3Q5JS37 347 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 JAGN1Q8N5M9 183 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 COMMD1Q8N668 190 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 OR52L2PQ8NGH6 319 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 MYCBPQ99417 103 aaPredicted RBP12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 BABAM2Q9NXR7 383 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 SCOCQ9UIL1 159 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 MRPS28Q9Y2Q9 187 aaKnown RBP12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 PEX16Q9Y5Y5 336 aa12.42□□□□□ -0.42
ERGIC3-217ENST00000488935 TRBV5-5A0A0J9YX44 114 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 ORC5O43913 435 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 GTF2F2P13984 249 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 CFHR3Q02985 330 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 KIR2DS1Q14954 304 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 RAB12Q6IQ22 244 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 PQLC1Q8N2U9 271 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 OR52M1Q8NGK5 317 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 CASTOR1Q8WTX7 329 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 SMIM19Q96E16 107 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 KCTD7Q96MP8 289 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 OR14A2Q96R54 314 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 SELENOIQ9C0D9 397 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 GNB4Q9HAV0 340 aa12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 LSM4Q9Y4Z0 139 aaKnown RBP12.41□□□□□ -0.42
ERGIC3-217ENST00000488935 MCRIP1C9JLW8 97 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 SNRPBP14678 240 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 VDAC1P21796 283 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 IL3RAP26951 378 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 SOX6P35712 828 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 PPP1CCP36873 323 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 CDX1P47902 265 aaPredicted RBP12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 FOXE3Q13461 319 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 LRRC36Q1X8D7 754 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 MPV17LQ2QL34 196 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 ZNF260Q3ZCT1 412 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 CCDC58Q4VC31 144 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 TMPRSS11AQ6ZMR5 421 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 STX19Q8N4C7 294 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 FAM71E2Q8N5Q1 922 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 ZNF555Q8NEP9 628 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 OR11H1Q8NG94 326 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 OR5M8Q8NGP6 311 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 OR8U1Q8NH10 309 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 FAM46BQ96A09 425 aa12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 ALX4Q9H161 411 aaPredicted RBP12.4□□□□□ -0.42
ERGIC3-217ENST00000488935 SORL1Q92673 2214 aa12.39□□□□□ -0.43
ERGIC3-217ENST00000488935 SPINT2O43291 252 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms