RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 NEK7Q8TDX7 302 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 S1PR3Q99500 378 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 RASL11BQ9BPW5 248 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 NCOR1P1Q9H4R4 102 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 GNB4Q9HAV0 340 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 GFOD1Q9NXC2 390 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 IRGMA1A4Y4 181 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 CASQ2O14958 399 aaPredicted RBP10.85□□□□□ -0.67
VARS-226ENST00000483275 MAGEB3O15480 346 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 MOSP00540 346 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 VDAC1P21796 283 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 CDX1P47902 265 aaPredicted RBP10.85□□□□□ -0.67
VARS-226ENST00000483275 PAX5Q02548 391 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 KIR2DS1Q14954 304 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 DDI2Q5TDH0 399 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 ASPHD1Q5U4P2 390 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 C5orf24Q7Z6I8 188 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 SYS1Q8N2H4 156 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 FAM71E2Q8N5Q1 922 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 OR10A7Q8NGE5 316 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 OR52N1Q8NH53 320 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 C4orf3Q8WVX3 66 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 ST6GALNAC6Q969X2 333 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 KCTD7Q96MP8 289 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 JAM3Q9BX67 310 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 KLK15Q9H2R5 256 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 ZNF256Q9Y2P7 627 aaPredicted RBP10.85□□□□□ -0.67
VARS-226ENST00000483275 WSB1Q9Y6I7 421 aa10.85□□□□□ -0.67
VARS-226ENST00000483275 G3V318 75 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 AIPO00170 330 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 RRP9O43818 475 aaKnown RBP10.84□□□□□ -0.67
VARS-226ENST00000483275 CNTFRP26992 372 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 CAPGP40121 348 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 KCNJ3P48549 501 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 GBX2P52951 348 aaPredicted RBP10.84□□□□□ -0.67
VARS-226ENST00000483275 GNB1P62873 340 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 MED21Q13503 144 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 FHL3Q13643 280 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 SLC22A6Q4U2R8 563 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 SLC16A12Q6ZSM3 486 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 C8orf59Q8N0T1 100 aaPredicted RBP10.84□□□□□ -0.67
VARS-226ENST00000483275 RNF152Q8N8N0 203 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 Q8NFD4 153 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 OR11H1Q8NG94 326 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 OR52I1Q8NGK6 324 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 OR1L1Q8NH94 360 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 ALX4Q9H161 411 aaPredicted RBP10.84□□□□□ -0.67
VARS-226ENST00000483275 METTL9Q9H1A3 318 aa10.84□□□□□ -0.67
VARS-226ENST00000483275 SIRT4Q9Y6E7 314 aaPredicted RBP10.84□□□□□ -0.67
VARS-226ENST00000483275 C12orf77C9JDV5 145 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 IGHG4P01861 327 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 CSTBP04080 98 aaKnown RBP10.83□□□□□ -0.68
VARS-226ENST00000483275 ELANEP08246 267 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 LIMS3P0CW19 117 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 LIMS4P0CW20 117 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 IL3RAP26951 378 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 PSMB8P28062 276 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 SOX6P35712 828 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 ZNF134P52741 427 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 GP2P55259 537 aaKnown RBP10.83□□□□□ -0.68
VARS-226ENST00000483275 ADARB1P78563 741 aaKnown RBP10.83□□□□□ -0.68
VARS-226ENST00000483275 MRPL28Q13084 256 aaKnown RBP10.83□□□□□ -0.68
VARS-226ENST00000483275 GNMTQ14749 295 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 ASCL4Q6XD76 172 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 ZNF497Q6ZNH5 498 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 OVCH2Q7RTZ1 564 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 LINC00311Q8N616 119 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 ZNF439Q8NDP4 499 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 OR4K15Q8NH41 348 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 CASTOR1Q8WTX7 329 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 APH1BQ8WW43 257 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 TMEM106AQ96A25 262 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 CPNE2Q96FN4 548 aaPredicted RBP10.83□□□□□ -0.68
VARS-226ENST00000483275 RITA1Q96K30 269 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 LYSTQ99698 3801 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 VCX3BQ9H321 246 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 IFT22Q9H7X7 185 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 CHCHD3Q9NX63 227 aaKnown RBP10.83□□□□□ -0.68
VARS-226ENST00000483275 GNG12Q9UBI6 72 aa10.83□□□□□ -0.68
VARS-226ENST00000483275 ZMAT5Q9UDW3 170 aaKnown RBP10.83□□□□□ -0.68
VARS-226ENST00000483275 ZNF107Q9UII5 783 aaPredicted RBP10.83□□□□□ -0.68
VARS-226ENST00000483275 CSMD3Q7Z407 3707 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 MT-ND4P03905 459 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 MYL12AP19105 171 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 GZMHP20718 246 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 CD1BP29016 333 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 ZNF93P35789 620 aaPredicted RBP10.82□□□□□ -0.68
VARS-226ENST00000483275 MMDQ15546 238 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 SMN1Q16637 294 aaKnown RBP10.82□□□□□ -0.68
VARS-226ENST00000483275 CT45A1Q5HYN5 189 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 NHLRC3Q5JS37 347 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 OR2G6Q5TZ20 316 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 SLC25A48Q6ZT89 311 aaKnown RBP10.82□□□□□ -0.68
VARS-226ENST00000483275 SBSPONQ8IVN8 264 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 CT45A3Q8NHU0 189 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 GON7Q9BXV9 100 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 MRPL20Q9BYC9 149 aaKnown RBP10.82□□□□□ -0.68
VARS-226ENST00000483275 ISYNA1Q9NPH2 558 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 PARP11Q9NR21 331 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 MRPS18AQ9NVS2 196 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms