RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 RWDD2BP57060 319 aa1.38□□□□□ -2.19
CALD1-219ENST00000480638 TRIP13Q15645 432 aaPredicted RBP1.38□□□□□ -2.19
CALD1-219ENST00000480638 FAM183BPQ6ZVS7 135 aa1.38□□□□□ -2.19
CALD1-219ENST00000480638 TAPBPLQ9BX59 468 aa1.38□□□□□ -2.19
CALD1-219ENST00000480638 BZW2Q9Y6E2 419 aaKnown RBP1.38□□□□□ -2.19
CALD1-219ENST00000480638 USH1CQ9Y6N9 552 aa1.38□□□□□ -2.19
CALD1-219ENST00000480638 CEP350Q5VT06 3117 aa1.38□□□□□ -2.19
CALD1-219ENST00000480638 MDC1Q14676 2089 aaKnown RBP1.38□□□□□ -2.19
CALD1-219ENST00000480638 LAMB2P55268 1798 aa1.37□□□□□ -2.19
CALD1-219ENST00000480638 C8orf87E5RJ46 101 aa1.37□□□□□ -2.19
CALD1-219ENST00000480638 NQO1P15559 274 aaKnown RBP1.37□□□□□ -2.19
CALD1-219ENST00000480638 GABRA3P34903 492 aa1.37□□□□□ -2.19
CALD1-219ENST00000480638 RPA3P35244 121 aaPredicted RBP1.37□□□□□ -2.19
CALD1-219ENST00000480638 C1QTNF8P60827 252 aa1.37□□□□□ -2.19
CALD1-219ENST00000480638 OR9I1Q8NGQ6 314 aa1.37□□□□□ -2.19
CALD1-219ENST00000480638 SUN5Q8TC36 379 aa1.37□□□□□ -2.19
CALD1-219ENST00000480638 TMBIM1Q969X1 311 aa1.37□□□□□ -2.19
CALD1-219ENST00000480638 SMDT1Q9H4I9 107 aa1.37□□□□□ -2.19
CALD1-219ENST00000480638 VPS37CA5D8V6 355 aaPredicted RBP1.36□□□□□ -2.19
CALD1-219ENST00000480638 SIGLEC16A6NMB1 481 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 EPPINO95925 133 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 LPAR6P43657 344 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 BSPH1Q075Z2 132 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 VAMP3Q15836 100 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 PDCL2Q8N4E4 241 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 DTD1Q8TEA8 209 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 CIDECQ96AQ7 238 aaPredicted RBP1.36□□□□□ -2.19
CALD1-219ENST00000480638 GLT1D1Q96MS3 346 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 FAAP24Q9BTP7 215 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 TMBIM4Q9HC24 238 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 TXNL4BQ9NX01 149 aaKnown RBP1.36□□□□□ -2.19
CALD1-219ENST00000480638 NCKAP5O14513 1909 aa1.36□□□□□ -2.19
CALD1-219ENST00000480638 ERCC6L2Q5T890 1561 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 PSMD11O00231 422 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 VSNL1P62760 191 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 EBLN2Q6P2I7 272 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 SSX6Q7RTT6 188 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 TRIML2Q8N7C3 387 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 NAP1L5Q96NT1 182 aaPredicted RBP1.35□□□□□ -2.19
CALD1-219ENST00000480638 CLEC2DQ9UHP7 191 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 SCML1Q9UN30 329 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 PXDNLA1KZ92 1463 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 PTPRJQ12913 1337 aa1.35□□□□□ -2.19
CALD1-219ENST00000480638 USP42Q9H9J4 1324 aaKnown RBP1.35□□□□□ -2.19
CALD1-219ENST00000480638 K7EQS6 105 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 SOD1P00441 154 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 CSTAP01040 98 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 IGHV3-30-3P0DP02 117 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 CD36P16671 472 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 AKR1C2P52895 323 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 TSPAN5P62079 268 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 DEFA6Q01524 100 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 CD164Q04900 197 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 VN1R4Q7Z5H5 301 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 ACBD4Q8NC06 268 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 OR4X1Q8NH49 305 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 ZNF563Q8TA94 476 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 OR5P2Q8WZ92 322 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 PGLYRP3Q96LB9 341 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 Q9BRP9 147 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 C1QTNF6Q9BXI9 259 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 C16orf95Q9H693 158 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 C11orf49Q9H6J7 331 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 TAS2R13Q9NYV9 303 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 ARHGAP32A7KAX9 2087 aa1.34□□□□□ -2.19
CALD1-219ENST00000480638 FLG2Q5D862 2391 aaPredicted RBP1.33□□□□□ -2.2
CALD1-219ENST00000480638 GPX1P07203 203 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 AKR1C4P17516 323 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 AQP5P55064 265 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 LGALS9CQ6DKI2 356 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 CCDC121Q6ZUS5 278 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 FAM45AQ8TCE6 357 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 C16orf78Q8WTQ4 265 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 GALMQ96C23 342 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 HINT2Q9BX68 163 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 HAUS4Q9H6D7 363 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 METTL8Q9H825 291 aaKnown RBP1.33□□□□□ -2.2
CALD1-219ENST00000480638 IFT46Q9NQC8 304 aa1.33□□□□□ -2.2
CALD1-219ENST00000480638 RTEL1-TNFRSF6BF6WH68 1400 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 CUL9Q8IWT3 2517 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 ATAD5Q96QE3 1844 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 IGLV3-9A0A075B6K5 115 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 PDGFRLQ15198 375 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 TPRXLQ17RH7 258 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 Q6ZRN7 208 aaPredicted RBP1.32□□□□□ -2.2
CALD1-219ENST00000480638 SELENOHQ8IZQ5 122 aaKnown RBP1.32□□□□□ -2.2
CALD1-219ENST00000480638 OR11L1Q8NGX0 322 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 MBOAT7Q96N66 472 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 EBNA1BP2Q99848 306 aaKnown RBP1.32□□□□□ -2.2
CALD1-219ENST00000480638 UPK3BQ9BT76 320 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 OR51E2Q9H255 320 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 RGS12O14924 1447 aa1.32□□□□□ -2.2
CALD1-219ENST00000480638 CHD8Q9HCK8 2581 aa1.31□□□□□ -2.2
CALD1-219ENST00000480638 MAST4O15021 2626 aa1.31□□□□□ -2.2
CALD1-219ENST00000480638 SETXQ7Z333 2677 aaKnown RBP1.31□□□□□ -2.2
CALD1-219ENST00000480638 IGHV3-73A0A0B4J1V6 119 aa1.31□□□□□ -2.2
CALD1-219ENST00000480638 B4DEV8 164 aa1.31□□□□□ -2.2
CALD1-219ENST00000480638 BOLA2-SMG1P6H3BVE0 249 aa1.31□□□□□ -2.2
CALD1-219ENST00000480638 POLR3GO15318 223 aaPredicted RBP1.31□□□□□ -2.2
CALD1-219ENST00000480638 FABP7O15540 132 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms