RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 RPS4Y2Q8TD47 263 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 OR5P3Q8WZ94 311 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 RAB1CQ92928 201 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 TMEM106AQ96A25 262 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 SPSB1Q96BD6 273 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 PGLYRP3Q96LB9 341 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 WWC2-AS2Q96NR7 200 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 CHST5Q9GZS9 411 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 CHODLQ9H9P2 273 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 GPR173Q9NS66 373 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 NUDT15Q9NV35 164 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 RASL12Q9NYN1 266 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF222Q9UK12 451 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 PPP1R3CQ9UQK1 317 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 POLDIP2Q9Y2S7 368 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 POMT1Q9Y6A1 747 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ARFGEF3Q5TH69 2177 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 RTTNQ86VV8 2226 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 TANC2Q9HCD6 1990 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 UTP20O75691 2785 aaKnown RBP5.2□□□□□ -1.58
SF3B1-209ENST00000479532 A0A0D9SG52 128 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TRBV5-5A0A0J9YX44 114 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TRDV1A0A1B0GX56 115 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 FAM230AA0A1W2PPH8 454 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 LRP5LA4QPB2 252 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 A6NIN4 97 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 MARCH11A6NNE9 402 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF732B4DXR9 585 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 DISC1C4P0D8 188 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 HSBP1L1C9JCN9 74 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 H0YL77 283 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 ITGB1BP1O14713 200 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 PPIHO43447 177 aaKnown RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 GSTZ1O43708 216 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 CIDEAO60543 219 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 ARL6IP5O75915 188 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 MT-ND4LP03901 98 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TCRBP04435 133 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 CRYBA1P05813 215 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 SLC25A16P16260 332 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 RCC1P18754 421 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 ATF1P18846 271 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 AZGP1P25311 298 aaKnown RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 MAS1LP35410 378 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TGFBR1P36897 503 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 GPR6P46095 362 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 GPM6AP51674 278 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TMEM33P57088 247 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 AP3S2P59780 193 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 SEC61A1P61619 476 aaKnown RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 NUTF2P61970 127 aaKnown RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 PITPNAQ00169 270 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 HNRNPA0Q13151 305 aaKnown RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 GPR176Q14439 515 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 CD300EQ496F6 205 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 ACSM3Q53FZ2 586 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TMEM42Q69YG0 159 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 CNIH2Q6PI25 160 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 GSG1LQ6UXU4 331 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 MOGAT3Q86VF5 341 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TPRA1Q86W33 373 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF525Q8N782 197 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 PNLDC1Q8NA58 520 aaKnown RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 BEST4Q8NFU0 473 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 OR51A4Q8NGJ6 313 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 OR13C9Q8NGT0 318 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 OR2T35Q8NGX2 323 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 OR10AC1Q8NH08 325 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 OR4K15Q8NH41 348 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF671Q8TAW3 534 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TRMT10AQ8TBZ6 339 aaKnown RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 PHYHIPQ92561 330 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 CCL17Q92583 94 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 RAB3CQ96E17 227 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 ADAT3Q96EY9 351 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 C14orf144Q96I85 54 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 NOL4LQ96MY1 436 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 GPER1Q99527 375 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TSNAXQ99598 290 aaKnown RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 CHMP1AQ9HD42 196 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-209ENST00000479532 SMCO4Q9NRQ5 59 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TMEM106BQ9NUM4 274 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 C1orf123Q9NWV4 160 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 TNFRSF18Q9Y5U5 241 aa5.19□□□□□ -1.58
SF3B1-209ENST00000479532 ROS1P08922 2347 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 CHD3Q12873 2000 aaKnown RBP5.18□□□□□ -1.58
SF3B1-209ENST00000479532 MEX3AA1L020 520 aaKnown RBP5.18□□□□□ -1.58
SF3B1-209ENST00000479532 J3QT63 122 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 AP4M1O00189 453 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 TCAPO15273 167 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 LMX1BO60663 402 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 NDUFS7O75251 213 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 NCR1O76036 304 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 MBP02144 154 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 EGR1P18146 543 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 BDKRB2P30411 391 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 BTCP35070 178 aa5.18□□□□□ -1.58
SF3B1-209ENST00000479532 MTCP1P56278 107 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms