RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SULT1A3P0DMM9 295 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SULT1A4P0DMN0 295 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 CD37P11049 281 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SLC2A1P11166 492 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 UGT2B7P16662 529 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 PSMA1P25786 263 aaKnown RBP2.86□□□□□ -1.95
BRCA1-212ENST00000473961 PAX6P26367 422 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 CRABP1P29762 137 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SLC6A1P30531 599 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SSTR5P35346 364 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ARL2P36404 184 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 KCNJ3P48549 501 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 NOVP48745 357 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 XKP51811 444 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF133P52736 654 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-212ENST00000473961 OR4D2P58180 307 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 OR2B8PP59922 312 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 KRTAP10-3P60369 221 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 C1QTNF8P60827 252 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 RAB2AP61019 212 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 RAP1AP62834 184 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 DYNLL1P63167 89 aaKnown RBP2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SLC35B1P78383 322 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 DCDP81605 110 aaKnown RBP2.86□□□□□ -1.95
BRCA1-212ENST00000473961 HOXC5Q00444 222 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 C2orf80Q0P641 193 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ATP6V1FQ16864 119 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF658BQ4V348 819 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-212ENST00000473961 PYCR3Q53H96 274 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 FBXW12Q6X9E4 464 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 AHSA2Q719I0 299 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 NDUFAF7Q7L592 441 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 DPPA2Q7Z7J5 298 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 Q8N402 240 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF561Q8N587 486 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ZFP41Q8N8Y5 198 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 OR8J3Q8NGG0 315 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 OR9Q1Q8NGQ5 310 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 RNF138Q8WVD3 245 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SLC25A46Q96AG3 418 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 C14orf144Q96I85 54 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 CPB2Q96IY4 423 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF681Q96N22 645 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 MCEEQ96PE7 176 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 GPR22Q99680 433 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 MGLLQ99685 303 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 CMSS1Q9BQ75 279 aaKnown RBP2.86□□□□□ -1.95
BRCA1-212ENST00000473961 AGMATQ9BSE5 352 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 RNF122Q9H9V4 155 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 EDA2RQ9HAV5 297 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ABCB9Q9NP78 766 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 PRSS16Q9NQE7 514 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 C14orf105Q9NVL8 296 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ANAPC11Q9NYG5 84 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 MTFP1Q9UDX5 166 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 POLR3HQ9Y535 204 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-212ENST00000473961 NUBP2Q9Y5Y2 271 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 MEGF6O75095 1541 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SLIT2O94813 1529 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 LTN1O94822 1766 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SCN2AQ99250 2005 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 GTF3C1Q12789 2109 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 PAPPAQ13219 1627 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 LOXHD1Q8IVV2 1947 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 OTOFQ9HC10 1997 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 KIAA1551Q9HCM1 1747 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF646O15015 1829 aaPredicted RBP2.85□□□□□ -1.95
BRCA1-212ENST00000473961 ARFGEF1Q9Y6D6 1849 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 WI2-2373I1.2A0A1W2PRP0 233 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 RFPL4AA6NLU0 287 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 HMSDA8MTL9 139 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 DISC1C4P0D8 188 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 RFPL4AL1F8VTS6 287 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 H7C1H1 209 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 GPR171O14626 319 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 MPZL2O60487 215 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 SCN2BO60939 215 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 RP2O75695 350 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 GCGP01275 180 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 CTSLP07711 333 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 PGA5P0DJD9 388 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 MUC1P15941 1255 aaPredicted RBP2.85□□□□□ -1.95
BRCA1-212ENST00000473961 NFYAP23511 347 aaPredicted RBP2.85□□□□□ -1.95
BRCA1-212ENST00000473961 CCR7P32248 378 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 PMELP40967 661 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 CRATP43155 626 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 RPS10P46783 165 aaKnown RBP2.85□□□□□ -1.95
BRCA1-212ENST00000473961 EVX1P49640 407 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 RAB5CP51148 216 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 DAPP51397 102 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 POLR2JP52435 117 aaKnown RBP2.85□□□□□ -1.95
BRCA1-212ENST00000473961 CRISP3P54108 245 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 CDKN2DP55273 166 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 CYP24A1Q07973 514 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 ST3GAL4Q11206 333 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 BIKQ13323 160 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 RCAN2Q14206 197 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF266Q14584 549 aa2.85□□□□□ -1.95
BRCA1-212ENST00000473961 SNRNP35Q16560 246 aaKnown RBP2.85□□□□□ -1.95
BRCA1-212ENST00000473961 RSPO1Q2MKA7 263 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms