RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 COQ8AQ8NI60 647 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 IL1F10Q8WWZ1 152 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 CCL17Q92583 94 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 GALNT14Q96FL9 552 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 TOLLIPQ9H0E2 274 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 NAA60Q9H7X0 242 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 DLL4Q9NR61 685 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 OR1A1Q9P1Q5 309 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 OR2W1Q9Y3N9 320 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 PPIAL4AQ9Y536 164 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 PCNX1Q96RV3 2341 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 IGKV1D-13A0A0B4J2D9 117 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 TEX13DA0A0J9YY54 714 aaPredicted RBP7.81□□□□□ -1.16
VPS52-216ENST00000471309 C15orf65H3BRN8 121 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 GPR31O00270 319 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 SPINT2O43291 252 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 IFNA2P01563 188 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 HBZP02008 142 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 GYPAP02724 150 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 HEXAP06865 529 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 DANCRP0C864 163 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 IGKV1-13P0DP09 117 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 IL2RGP31785 369 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 H2BFSP57053 126 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 MRPS11P82912 194 aaKnown RBP7.81□□□□□ -1.16
VPS52-216ENST00000471309 HTD2P86397 168 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 SRSF4Q08170 494 aaKnown RBP7.81□□□□□ -1.16
VPS52-216ENST00000471309 SLC9A3R2Q15599 337 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 KCNJ8Q15842 424 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 C2orf68Q2NKX9 166 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 HFEQ30201 348 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 LY6G6FQ5SQ64 297 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 DCAF12L2Q5VW00 463 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 LIN54Q6MZP7 749 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 LDLRAD3Q86YD5 345 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 PRR18Q8N4B5 295 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 FAM216BQ8N7L0 139 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 TPRX1Q8N7U7 411 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 DRAXINQ8NBI3 349 aaPredicted RBP7.81□□□□□ -1.16
VPS52-216ENST00000471309 UXS1Q8NBZ7 420 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 DEFB108BQ8NET1 73 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 OR1L1Q8NH94 360 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 MRGPRDQ8TDS7 321 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 CASTOR1Q8WTX7 329 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 FAM216AQ8WUB2 273 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 RTN4IP1Q8WWV3 396 aaPredicted RBP7.81□□□□□ -1.16
VPS52-216ENST00000471309 GALMQ96C23 342 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 C14orf79Q96F83 325 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 CCL13Q99616 98 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 VRK1Q99986 396 aaPredicted RBP7.81□□□□□ -1.16
VPS52-216ENST00000471309 SLC5A7Q9GZV3 580 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 RAB1BQ9H0U4 201 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 RANBP3Q9H6Z4 567 aaPredicted RBP7.81□□□□□ -1.16
VPS52-216ENST00000471309 RAB9BQ9NP90 201 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 RDH8Q9NYR8 311 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 OR6C3Q9NZP0 311 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 PIPOXQ9P0Z9 390 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 KLF2Q9Y5W3 355 aaPredicted RBP7.81□□□□□ -1.16
VPS52-216ENST00000471309 COL6A6A6NMZ7 2263 aa7.81□□□□□ -1.16
VPS52-216ENST00000471309 PLCE1Q9P212 2302 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 A0A1B0GW55 424 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 A0A1W2PPR1 153 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 A6NNC1 897 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 G3V3Q6 166 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 SMLR1H3BR10 107 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 TNFRSF13BO14836 293 aaPredicted RBP7.8□□□□□ -1.16
VPS52-216ENST00000471309 HSPA12AO43301 675 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 NDUFA2O43678 99 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 RP2O75695 350 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 RGS11O94810 467 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 CD8AP01732 235 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 SOD3P08294 240 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 DUX4L2P0CJ85 424 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 DUX4L3P0CJ86 424 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 DUX4L4P0CJ87 422 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 DUX4L5P0CJ88 424 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 DUX4L6P0CJ89 424 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 DUX4L7P0CJ90 424 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 SELLP14151 372 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 GZMHP20718 246 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 GNRHRP30968 328 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 SSTR5P35346 364 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 LUMP51884 338 aaPredicted RBP7.8□□□□□ -1.16
VPS52-216ENST00000471309 NKX2-5P52952 324 aaPredicted RBP7.8□□□□□ -1.16
VPS52-216ENST00000471309 EDDM3BP56851 147 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 MSMO1Q15800 293 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 ANKRD55Q3KP44 614 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 TMEM30BQ3MIR4 351 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 PHLDA2Q53GA4 152 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 DUX4L9Q6RFH8 374 aaPredicted RBP7.8□□□□□ -1.16
VPS52-216ENST00000471309 MEX3BQ6ZN04 569 aaKnown RBP7.8□□□□□ -1.16
VPS52-216ENST00000471309 ZNF818PQ6ZRF7 136 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 KCTD9Q7L273 389 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 CMTM1Q8IZ96 169 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 LRTM2Q8N967 370 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 BVESQ8NE79 360 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 OR10V1Q8NGI7 309 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 OR2T35Q8NGX2 323 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 SECTM1Q8WVN6 248 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 NEU4Q8WWR8 484 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms