RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PCMT1P22061 227 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 OPRM1P35372 400 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 RPL5P46777 297 aaKnown RBP3.72□□□□□ -1.81
CCDC39-202ENST00000471307 PCBD1P61457 104 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 LCN6P62502 163 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 TGFBR3Q03167 851 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 EMX1Q04741 257 aaPredicted RBP3.72□□□□□ -1.81
CCDC39-202ENST00000471307 FMODQ06828 376 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 SGCAQ16586 387 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 CEACAM16Q2WEN9 425 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 LINC01620Q4KN68 170 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 TSPO2Q5TGU0 170 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 PYHIN1Q6K0P9 492 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 KCNIP4Q6PIL6 250 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF562Q6V9R5 426 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 TMPRSS11AQ6ZMR5 421 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 PLEKHG7Q6ZR37 379 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 Q6ZT83 130 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 DPPA2Q7Z7J5 298 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ERI1Q8IV48 349 aaKnown RBP3.72□□□□□ -1.81
CCDC39-202ENST00000471307 WDFY1Q8IWB7 410 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 SLC35F2Q8IXU6 374 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 SLC26A10Q8NG04 563 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 OR4F15Q8NGB8 312 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 OR51L1Q8NGJ5 315 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 OR51G2Q8NGK0 314 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 OTOSQ8NHW6 89 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 HAVCR2Q8TDQ0 301 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ASB17Q8WXJ9 295 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 SFXN3Q9BWM7 321 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ULBP2Q9BZM5 246 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 MAGT1Q9H0U3 335 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 MRPL22Q9NWU5 206 aaKnown RBP3.72□□□□□ -1.81
CCDC39-202ENST00000471307 GNG12Q9UBI6 72 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF629Q9UEG4 869 aaPredicted RBP3.72□□□□□ -1.81
CCDC39-202ENST00000471307 GSTK1Q9Y2Q3 226 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 UGT2A1Q9Y4X1 527 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 FAM215AQ9Y5M1 114 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 NPTNQ9Y639 398 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 COMMD3-BMI1R4GMX3 469 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 RTTNQ86VV8 2226 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 BSNQ9UPA5 3926 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 A0A1W2PQL4 384 aaPredicted RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 SMCO3A2RU48 225 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 TVP23AA6NH52 213 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 FBLL1A6NHQ2 334 aaKnown RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 METTL15A6NJ78 407 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 MYL12BO14950 172 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF254O75437 659 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 TNFSF13O75888 250 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 SULT1C4O75897 302 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 TOXO94900 526 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 MPZL1O95297 269 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 FARS2O95363 451 aaKnown RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 ECDO95905 644 aaPredicted RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 CST2P09228 141 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 LIMS3P0CW19 117 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 LIMS4P0CW20 117 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 OR8G3PP0DMU2 310 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 MSR1P21757 451 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 NAA10P41227 235 aaPredicted RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 CA7P43166 264 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 ETV1P50549 477 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 RAG2P55895 527 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 WNT4P56705 351 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 ACTA2P62736 377 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 ACTG2P63267 376 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 HIST1H3AP68431 136 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 BDH1Q02338 343 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 EIF2B1Q14232 305 aaKnown RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 CCDC58Q4VC31 144 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 SYT6Q5T7P8 510 aaPredicted RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 HIST2H3PS2Q5TEC6 136 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 UBE2UQ5VVX9 321 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 DEGS2Q6QHC5 323 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF322Q6U7Q0 402 aaPredicted RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 TFAP2EQ6VUC0 442 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 HIST2H3AQ71DI3 136 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 BIVMQ86UB2 503 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 LHFPL3Q86UP9 236 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 SYS1Q8N2H4 156 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 SLC22A24Q8N4F4 322 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 COMMD1Q8N668 190 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 CNEP1R1Q8N9A8 125 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 OR10H4Q8NGA5 316 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 OR6N2Q8NGY6 317 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 OR52N1Q8NH53 320 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 KCNG3Q8TAE7 436 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 THEM6Q8WUY1 208 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 C11orf40Q8WZ69 217 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 PIGCQ92535 297 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 RORBQ92753 470 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 STARD4Q96DR4 205 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 OR5M11Q96RB7 305 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF649Q9BS31 505 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 MND1Q9BWT6 205 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 C1orf198Q9H425 327 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 ISYNA1Q9NPH2 558 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 ACOT13Q9NPJ3 140 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 POLE4Q9NR33 117 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms