RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NPFFO15130 113 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 OR2H2O95918 312 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 HLA-DQB1P01920 261 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 DUSP1P28562 367 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 PRDX2P32119 198 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 SAA4P35542 130 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 KCNJ3P48549 501 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 PPP5CP53041 499 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 SCN1BQ07699 218 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 RBM39Q14498 530 aaKnown RBP7.38□□□□□ -1.23
SF3A1-206ENST00000471037 HERPUD1Q15011 391 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF79Q15937 498 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF260Q3ZCT1 412 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 CDNFQ49AH0 187 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 PAN3Q58A45 887 aaKnown RBP7.38□□□□□ -1.23
SF3A1-206ENST00000471037 PLAC9Q5JTB6 97 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 NKAPLQ5M9Q1 402 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 ATAD3CQ5T2N8 411 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 ATPAF1Q5TC12 328 aaPredicted RBP7.38□□□□□ -1.23
SF3A1-206ENST00000471037 HACD4Q5VWC8 232 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 C11orf88Q6PI97 169 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 Q6ZPA2 131 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 C1orf122Q6ZSJ8 110 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 REC114Q7Z4M0 266 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 IZUMO1Q8IYV9 350 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 FAM216BQ8N7L0 139 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 GDPD1Q8N9F7 314 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 ANGPTL6Q8NI99 470 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 PPP1R35Q8TAP8 253 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 SEH1LQ96EE3 360 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 ARHGAP5-AS1Q96IT6 56 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 ABHD1Q96SE0 405 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 PECRQ9BY49 303 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 SRRQ9GZT4 340 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 SCPEP1Q9HB40 452 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF222Q9UK12 451 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 DSCAML1Q8TD84 2053 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 TET2Q6N021 2002 aaPredicted RBP7.37□□□□□ -1.23
SF3A1-206ENST00000471037 TRAV24A0A0B4J272 114 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 MEIOCA2RUB1 952 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 TMEM235A6NFC5 223 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 MCRIP1C9JLW8 97 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 GABARAPH6UMI1 98 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 M0R1W7 72 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 SIRPB1O00241 398 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 SLC33A1O00400 549 aaPredicted RBP7.37□□□□□ -1.23
SF3A1-206ENST00000471037 NDUFB3O43676 98 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 GSTZ1O43708 216 aaPredicted RBP7.37□□□□□ -1.23
SF3A1-206ENST00000471037 GNB3P16520 340 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 AMY2BP19961 511 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 PRSS3P35030 304 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 GABRA2P47869 451 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 UBE2E1P51965 193 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 GNG2P59768 71 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 COL10A1Q03692 680 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 PYDC2Q56P42 97 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 LRRC10Q5BKY1 277 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 NCR3LG1Q68D85 454 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF788Q6ZQV5 615 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 C6orf201Q7Z4U5 140 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 SNX29P2Q8IUI4 249 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF561Q8N587 486 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 CD177Q8N6Q3 437 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 DTX3Q8N9I9 347 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 SUMF2Q8NBJ7 301 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 BEND2Q8NDZ0 799 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 OR5T2Q8NGG2 359 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 NEK7Q8TDX7 302 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 CFHR4Q92496 578 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 SDSLQ96GA7 329 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 MED30Q96HR3 178 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 SNX22Q96L94 193 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 CCDC32Q9BV29 185 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 DPCDQ9BVM2 203 aaPredicted RBP7.37□□□□□ -1.23
SF3A1-206ENST00000471037 FAM234AQ9H0X4 552 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 PPA2Q9H2U2 334 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 RANBP3Q9H6Z4 567 aaPredicted RBP7.37□□□□□ -1.23
SF3A1-206ENST00000471037 METTL8Q9H825 291 aaKnown RBP7.37□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF581Q9P0T4 197 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 KCNK7Q9Y2U2 307 aa7.37□□□□□ -1.23
SF3A1-206ENST00000471037 KIAA2026Q5HYC2 2103 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 K7N7A8 449 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 SIGLEC5O15389 551 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF737O75373 536 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 CSN2P05814 226 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 LPLP06858 475 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 CD3GP09693 182 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 KIR2DS4P43632 304 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 CBX5P45973 191 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 CEBPDP49716 269 aaPredicted RBP7.36□□□□□ -1.23
SF3A1-206ENST00000471037 MRPS15P82914 257 aaKnown RBP7.36□□□□□ -1.23
SF3A1-206ENST00000471037 PAX5Q02548 391 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 PRB3Q04118 309 aaPredicted RBP7.36□□□□□ -1.23
SF3A1-206ENST00000471037 SSBP1Q04837 148 aaKnown RBP7.36□□□□□ -1.23
SF3A1-206ENST00000471037 KLRD1Q13241 179 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 MADCAM1Q13477 382 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 ARFRP1Q13795 201 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 AANATQ16613 207 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 OR8H2Q8N162 312 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 Q8N402 240 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms