RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 H3BSA7 217 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 SLC25A20O43772 301 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 GUSBP08236 651 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 AKR1C4P17516 323 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 HSPA13P48723 471 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 STC1P52823 247 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 RAB25P57735 213 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 RAB2AP61019 212 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 FOXF1Q12946 379 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 XRCC4Q13426 336 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 CST6Q15828 149 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 LRRC26Q2I0M4 334 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 ZNF181Q2M3W8 571 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 TIMM23BQ5SRD1 257 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 SDIM1Q6ZPB5 146 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 ZNF567Q8N184 647 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 OR5D18Q8NGL1 313 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 PHOSPHO2Q8TCD6 241 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 SPPL2BQ8TCT7 592 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 DYNC2LI1Q8TCX1 351 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 GTF2H4Q92759 462 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 HIST1H2BAQ96A08 127 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 GALMQ96C23 342 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 CYTH2Q99418 400 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 CHST5Q9GZS9 411 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 CXCL16Q9H2A7 254 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 FBXL15Q9H469 300 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 METTL17Q9H7H0 456 aaPredicted RBP0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 MRPL16Q9NX20 251 aaKnown RBP0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 HSPE1-MOB4S4R3N1 261 aa0.73□□□□□ -2.29
NUCKS1-202ENST00000464938 CRB1P82279 1406 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 OTOGLQ3ZCN5 2332 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 MAP3K19Q56UN5 1328 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 TMEM213A2RRL7 107 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 ARGFXA6NJG6 315 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 ODF3BA8MYP8 253 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 C9J4A7 227 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 F5H5K5 113 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 GOLGA8RI6L899 631 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 MPZL2O60487 215 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 NEMFO60524 1076 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 ZNF189O75820 626 aaPredicted RBP0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 TNFAIP8O95379 198 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 SNAP29O95721 258 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 OR12D1P0DN82 309 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 IGHV3-30-3P0DP02 117 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 CSRP1P21291 193 aaKnown RBP0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 S100A2P29034 98 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 ACTR1BP42025 376 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 PSG4Q00888 419 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 PDGFRLQ15198 375 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 SS18Q15532 418 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 PCOTHQ58A44 107 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 HENMT1Q5T8I9 393 aaKnown RBP0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 NIPAL1Q6NVV3 410 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 NOXRED1Q6NXP6 359 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 EBLN2Q6P2I7 272 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 ZNF322Q6U7Q0 402 aaPredicted RBP0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 ZNF767PQ75MW2 155 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 TCF23Q7RTU1 214 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 MSRB3Q8IXL7 192 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 C2orf73Q8N5S3 287 aaPredicted RBP0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 YIPF7Q8N8F6 280 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 OR4P4Q8NGL7 312 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 OR11L1Q8NGX0 322 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 ZNRF2Q8NHG8 242 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 RNASEH2CQ8TDP1 164 aaKnown RBP0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 CCDC127Q96BQ5 260 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 TAMM41Q96BW9 452 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 TMEM56Q96MV1 263 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 C1QTNF6Q9BXI9 259 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 GNB1LQ9BYB4 327 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 GTSF1LQ9H1H1 148 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 C16orf95Q9H693 158 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 TUBA4BQ9H853 241 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 TREM1Q9NP99 234 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 UBQLN4Q9NRR5 601 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 TMEM106BQ9NUM4 274 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 MS4A12Q9NXJ0 267 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 COMMD9Q9P000 198 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 PSORS1C2Q9UIG4 136 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 FBXL3Q9UKT7 428 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 CCL26Q9Y258 94 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 MRPS16Q9Y3D3 137 aaKnown RBP0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 MMACHCQ9Y4U1 282 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 ATAD5Q96QE3 1844 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 PLCH2O75038 1416 aa0.72□□□□□ -2.29
NUCKS1-202ENST00000464938 LRPPRCP42704 1394 aaKnown RBP0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 MYO16Q9Y6X6 1858 aa0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 PTPRJQ12913 1337 aa0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 LOC102725191A0A1B0GVB3 256 aa0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 IGSF23A1L1A6 192 aa0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 A8MWP6 167 aa0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 EFCAB9A8MZ26 197 aa0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 M0QX08 132 aa0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 M0QYV0 167 aa0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 SULT1C2O00338 296 aa0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 EEF1E1O43324 174 aaKnown RBP0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 NDUFS6O75380 124 aaKnown RBP0.71□□□□□ -2.3
NUCKS1-202ENST00000464938 CBR1P16152 277 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms