RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 RAB27BO00194 218 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 SSX2Q16385 188 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 LTC4SQ16873 150 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 LRRC75BQ2VPJ9 315 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 HLA-DRB5Q30154 266 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 C6orf183Q5T699 404 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 ZNF880Q6PDB4 577 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 Q6ZTK2 550 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 ZNF554Q86TJ5 538 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 OR9G1Q8NH87 305 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 LEAP2Q969E1 77 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 MRPS26Q9BYN8 205 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 AK3Q9UIJ7 227 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 KCNK7Q9Y2U2 307 aa16.66■□□□□ 0.26
RPUSD3-210ENST00000460909 FAM181BA6NEQ2 426 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 LY6LH3BQJ8 138 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 J3QR06 171 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 IGHV3-7P01780 117 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 TFAP2AP05549 437 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 HTR1DP28221 377 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 LSM3P62310 102 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 FAM53AQ6NSI3 398 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 TRAT1Q6PIZ9 186 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 C5orf24Q7Z6I8 188 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 OR5R1Q8NH85 324 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 OR1L1Q8NH94 360 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 SPATA3Q8NHX4 192 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 TAF15Q92804 592 aaKnown RBP eCLIP16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 MMP28Q9H239 520 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 TAF9BQ9HBM6 251 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 DPM3Q9P2X0 92 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 VPREB3Q9UKI3 123 aa16.65■□□□□ 0.26
RPUSD3-210ENST00000460909 TRBV6-6A0A0A6YYG2 114 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 BUB1B-PAK6H3BSN5 160 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 H3BUX3 64 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 TOR1AO14656 332 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 SPINT2O43291 252 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 GPR137BO60478 399 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 HBZP02008 142 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 HKR1P10072 659 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 SNRPBP14678 240 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 ALDH3B2P48448 385 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 PRRX1P54821 245 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 ACTG1P63261 375 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 OLFML2AQ68BL7 652 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 OR10R2Q8NGX6 335 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 NDNFQ8TB73 568 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 HDHD3Q9BSH5 251 aaPredicted RBP16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 GFOD1Q9NXC2 390 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 HILPDAQ9Y5L2 63 aa16.64■□□□□ 0.25
RPUSD3-210ENST00000460909 SDCBPO00560 298 aaPredicted RBP16.63■□□□□ 0.25
RPUSD3-210ENST00000460909 RPS19P39019 145 aaKnown RBP16.63■□□□□ 0.25
RPUSD3-210ENST00000460909 HMGN3Q15651 99 aa16.63■□□□□ 0.25
RPUSD3-210ENST00000460909 FAM189A2Q15884 450 aa16.63■□□□□ 0.25
RPUSD3-210ENST00000460909 LGALS14Q8TCE9 139 aa16.63■□□□□ 0.25
RPUSD3-210ENST00000460909 RAB3CQ96E17 227 aa16.63■□□□□ 0.25
RPUSD3-210ENST00000460909 RIMS4Q9H426 269 aaPredicted RBP16.63■□□□□ 0.25
RPUSD3-210ENST00000460909 IGHV3-43A0A0B4J1X8 118 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 METTL21EPA6NDL7 271 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 LEUTXA8MZ59 168 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 IGHV3-43DP0DP04 118 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 COMPP49747 757 aaPredicted RBP16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 RAB13P51153 203 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 DYNLT3P51808 116 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 SCAND1P57086 179 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 RPL15P61313 204 aaKnown RBP16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 TMEM30BQ3MIR4 351 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 PLA1AQ53H76 456 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 IDNKQ5T6J7 187 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 PRR18Q8N4B5 295 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 C8orf31Q8N9H6 132 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 OR5H6Q8NGV6 325 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 GCDHQ92947 438 aaPredicted RBP16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 CREB3L1Q96BA8 519 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 RAB9BQ9NP90 201 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 KCNIP1Q9NZI2 227 aa16.62■□□□□ 0.25
RPUSD3-210ENST00000460909 A0A1W2PPE3 182 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 BTBD17A6NE02 478 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 POM121CA8CG34 1229 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 MFNGO00587 321 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 TMEM127O75204 238 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 GNG10P50151 68 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 NCS1P62166 190 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 RELBQ01201 579 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 Q3ZCU0 254 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 TPTE2P1Q5T6R2 138 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 ANKRD13BQ86YJ7 626 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 LINC00311Q8N616 119 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 ZNF439Q8NDP4 499 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 NAA50Q9GZZ1 169 aaKnown RBP16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 ATG5Q9H1Y0 275 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 C1RLQ9NZP8 487 aa16.61■□□□□ 0.25
RPUSD3-210ENST00000460909 HIST1H1DP16402 221 aaKnown RBP16.6■□□□□ 0.25
RPUSD3-210ENST00000460909 GNB3P16520 340 aa16.6■□□□□ 0.25
RPUSD3-210ENST00000460909 CEACAM3P40198 252 aa16.6■□□□□ 0.25
RPUSD3-210ENST00000460909 VBP1P61758 197 aa16.6■□□□□ 0.25
RPUSD3-210ENST00000460909 HTD2P86397 168 aa16.6■□□□□ 0.25
RPUSD3-210ENST00000460909 LY6EQ16553 131 aa16.6■□□□□ 0.25
RPUSD3-210ENST00000460909 CTF1Q16619 201 aa16.6■□□□□ 0.25
RPUSD3-210ENST00000460909 CROCCP3Q8IVE0 287 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms