RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 NKX2-8O15522 239 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 ONECUT2O95948 504 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 FUT3P21217 361 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 NUFIP2Q7Z417 695 aaKnown RBP13.27□□□□□ -0.28
LMNB1-203ENST00000460265 TRGV5A0A0B4J1U4 118 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 C19orf67A6NJJ6 358 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 BCL3P20749 454 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 VAMP2P63027 116 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 VAX1Q5SQQ9 334 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 RTL6Q6ICC9 239 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 ZDHHC23Q8IYP9 409 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 OR51H1Q8NH63 302 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 MRGPRFQ96AM1 343 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 V9GYS6 101 aa13.27□□□□□ -0.28
LMNB1-203ENST00000460265 SLC22A20A6NK97 555 aa13.27□□□□□ -0.29
LMNB1-203ENST00000460265 RBMXL2O75526 392 aaKnown RBP13.27□□□□□ -0.29
LMNB1-203ENST00000460265 MMP7P09237 267 aaPredicted RBP13.27□□□□□ -0.29
LMNB1-203ENST00000460265 OR5R1Q8NH85 324 aa13.27□□□□□ -0.29
LMNB1-203ENST00000460265 FRZBQ92765 325 aa13.27□□□□□ -0.29
LMNB1-203ENST00000460265 HIST1H2BLQ99880 126 aa13.27□□□□□ -0.29
LMNB1-203ENST00000460265 SNHG12Q9BXW3 62 aa13.27□□□□□ -0.29
LMNB1-203ENST00000460265 CBLN4Q9NTU7 201 aa13.27□□□□□ -0.29
LMNB1-203ENST00000460265 IL36RNQ9UBH0 155 aa13.27□□□□□ -0.29
LMNB1-203ENST00000460265 NPSP0C0P6 89 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 NOVA1P51513 510 aaKnown RBP13.26□□□□□ -0.29
LMNB1-203ENST00000460265 GNMTQ14749 295 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 ZNF766Q5HY98 468 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 LYZL2Q7Z4W2 148 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 COMMD1Q8N668 190 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 BEND2Q8NDZ0 799 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 RNF138Q8WVD3 245 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 Q96M66 194 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 TRIB1Q96RU8 372 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 RTBDNQ9BSG5 229 aaPredicted RBP13.26□□□□□ -0.29
LMNB1-203ENST00000460265 TMEM208Q9BTX3 173 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 GPR87Q9BY21 358 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 PLA2G2EQ9NZK7 142 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 MUC6Q6W4X9 2439 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 SP1P08047 785 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 PTGER4P35408 488 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 DNLZQ5SXM8 178 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 DMRTA1Q5VZB9 504 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 TMEM230Q96A57 120 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 RAB39BQ96DA2 213 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 FZR1Q9UM11 496 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 IGKV1-12A0A0C4DH73 117 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 DLEU1O43261 78 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 DNPH1O43598 174 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 PDCD6O75340 191 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 IGKV1D-12P01611 117 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 CCL1P22362 96 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 TMEM33P57088 247 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 ELOBQ15370 118 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 TMEM268Q5VZI3 342 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 FAHD2BQ6P2I3 314 aaPredicted RBP13.26□□□□□ -0.29
LMNB1-203ENST00000460265 TMEM217Q8N7C4 229 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 FAHD2AQ96GK7 314 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 OBP2BQ9NPH6 170 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 PLCE1Q9P212 2302 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 CEP295Q9C0D2 2601 aa13.26□□□□□ -0.29
LMNB1-203ENST00000460265 H3BQ15 152 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 CD59P13987 128 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 FAM213BQ8TBF2 198 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 ZNF703Q9H7S9 590 aaPredicted RBP13.25□□□□□ -0.29
LMNB1-203ENST00000460265 RAB18Q9NP72 206 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 COL6A6A6NMZ7 2263 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 SIRPB1O00241 398 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 JOSD1Q15040 202 aaPredicted RBP13.25□□□□□ -0.29
LMNB1-203ENST00000460265 AADACL3Q5VUY0 350 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 LYPD6Q86Y78 171 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 APOBEC3DQ96AK3 386 aaPredicted RBP13.25□□□□□ -0.29
LMNB1-203ENST00000460265 LIPGQ9Y5X9 500 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 ABCA4P78363 2273 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 CD300LBA8K4G0 201 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 ZNF724A8MTY0 619 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 PGA5P0DJD9 388 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 S100GP29377 79 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 SOX8P57073 446 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 ERVFRD-1P60508 538 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 RARRES2Q99969 163 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 SLC25A31Q9H0C2 315 aa13.25□□□□□ -0.29
LMNB1-203ENST00000460265 DFFBO76075 338 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 HKR1P10072 659 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 GZMBP10144 247 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 SELEP16581 610 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 MDKP21741 143 aaPredicted RBP13.24□□□□□ -0.29
LMNB1-203ENST00000460265 CTSSP25774 331 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 A6NNC1 897 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 SYNGR1O43759 233 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 AADACP22760 399 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 CRYGSP22914 178 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 RPL29P47914 159 aaKnown RBP13.24□□□□□ -0.29
LMNB1-203ENST00000460265 TGFBR3Q03167 851 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 SRSF6Q13247 344 aaKnown RBP13.24□□□□□ -0.29
LMNB1-203ENST00000460265 MRPL49Q13405 166 aaKnown RBP13.24□□□□□ -0.29
LMNB1-203ENST00000460265 LTC4SQ16873 150 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 TMEM178AQ8NBL3 297 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 HPSE2Q8WWQ2 592 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 FAM210BQ96KR6 192 aa13.24□□□□□ -0.29
LMNB1-203ENST00000460265 BORCS7-ASMTA0A0B4J1R7 106 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms