RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 C12orf77C9JDV5 145 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 C15orf65H3BRN8 121 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 LDLRAD4O15165 306 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 WIPF1O43516 503 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 AIREO43918 545 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 IGLV1-47P01700 117 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 RAB6AP20340 208 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 MXD1Q05195 221 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 Q6ZTK2 550 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 ZNF554Q86TJ5 538 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 PRR18Q8N4B5 295 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 OR52M1Q8NGK5 317 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 MRPL30Q8TCC3 161 aaKnown RBP17.6■□□□□ 0.41
SSNA1-202ENST00000459860 CENPOQ9BU64 300 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 MMP28Q9H239 520 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 RIMS4Q9H426 269 aaPredicted RBP17.6■□□□□ 0.41
SSNA1-202ENST00000459860 DAPK2Q9UIK4 370 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 HSF4Q9ULV5 492 aa17.6■□□□□ 0.41
SSNA1-202ENST00000459860 SLC2A2P11168 524 aaPredicted RBP17.59■□□□□ 0.41
SSNA1-202ENST00000459860 PAX6P26367 422 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 GNG10P50151 68 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 DHRS7BQ6IAN0 325 aaPredicted RBP17.59■□□□□ 0.41
SSNA1-202ENST00000459860 SFXN4Q6P4A7 337 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 MOB1BQ7L9L4 216 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 NR2C2APQ86WQ0 139 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 UBALD1Q8TB05 177 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 LEAP2Q969E1 77 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 PTX4Q96A99 478 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 YIPF6Q96EC8 236 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 RNF167Q9H6Y7 350 aa17.59■□□□□ 0.41
SSNA1-202ENST00000459860 MBNL3Q9NUK0 354 aaKnown RBP17.59■□□□□ 0.41
SSNA1-202ENST00000459860 VGLL3A8MV65 326 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 BUB1B-PAK6H3BSN5 160 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 J3QR06 171 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 F2RL2O00254 374 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 HBZP02008 142 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 RCC1P18754 421 aaPredicted RBP17.58■□□□□ 0.4
SSNA1-202ENST00000459860 MRPS15P82914 257 aaKnown RBP17.58■□□□□ 0.4
SSNA1-202ENST00000459860 LY6EQ16553 131 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 CCDC144NLQ6NUI1 221 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 LIAT1Q6ZQX7 453 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 DYNAPQ8N1N2 210 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 SETD6Q8TBK2 473 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 ARHGAP5-AS1Q96IT6 56 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 TAF9BQ9HBM6 251 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 RAB18Q9NP72 206 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 GFOD1Q9NXC2 390 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 ABRACLQ9P1F3 81 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 GNG12Q9UBI6 72 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 PITPNC1Q9UKF7 332 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 PSG11Q9UQ72 335 aa17.58■□□□□ 0.4
SSNA1-202ENST00000459860 A0A0B4J203 849 aa17.57■□□□□ 0.4
SSNA1-202ENST00000459860 IGHV3-7P01780 117 aa17.57■□□□□ 0.4
SSNA1-202ENST00000459860 LDLRAD2Q5SZI1 272 aa17.57■□□□□ 0.4
SSNA1-202ENST00000459860 OR10X1Q8NGY0 326 aa17.57■□□□□ 0.4
SSNA1-202ENST00000459860 OR4F5Q8NH21 305 aa17.57■□□□□ 0.4
SSNA1-202ENST00000459860 RAB3CQ96E17 227 aa17.57■□□□□ 0.4
SSNA1-202ENST00000459860 PECRQ9BY49 303 aa17.57■□□□□ 0.4
SSNA1-202ENST00000459860 MRPS26Q9BYN8 205 aaKnown RBP17.57■□□□□ 0.4
SSNA1-202ENST00000459860 C12orf4Q9NQ89 552 aa17.57■□□□□ 0.4
SSNA1-202ENST00000459860 AK3Q9UIJ7 227 aa17.57■□□□□ 0.4
SSNA1-202ENST00000459860 MEGF8Q7Z7M0 2845 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 IGHV3-43A0A0B4J1X8 118 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 FOXI3A8MTJ6 420 aaPredicted RBP17.56■□□□□ 0.4
SSNA1-202ENST00000459860 OOSP1A8MZH6 123 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 CLEC2LP0C7M8 214 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 IGHV3-43DP0DP04 118 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 BRS3P32247 399 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 MNDAP41218 407 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 DYNLT3P51808 116 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 EFNB2P52799 333 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 RAG2P55895 527 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 PLA2G7Q13093 441 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 Q3ZCU0 254 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 TPTE2P1Q5T6R2 138 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 OR10R2Q8NGX6 335 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 OR1L1Q8NH94 360 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 TOMM40LQ969M1 308 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 RPEQ96AT9 228 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 ATG5Q9H1Y0 275 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 MGAT4AQ9UM21 535 aa17.56■□□□□ 0.4
SSNA1-202ENST00000459860 NAPSAO96009 420 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 SMIM18P0DKX4 95 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 IL3RAP26951 378 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 TMEM50BP56557 158 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 LSM3P62310 102 aaKnown RBP17.55■□□□□ 0.4
SSNA1-202ENST00000459860 MADCAM1Q13477 382 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 ARL6IP1Q15041 203 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 AWAT1Q58HT5 328 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 CROCCP3Q8IVE0 287 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 GALMQ96C23 342 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 CYYR1Q96J86 154 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 CMSS1Q9BQ75 279 aaKnown RBP17.55■□□□□ 0.4
SSNA1-202ENST00000459860 C1RLQ9NZP8 487 aa17.55■□□□□ 0.4
SSNA1-202ENST00000459860 TMEM127O75204 238 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 SCGNO76038 276 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 NDUFA7O95182 113 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 CD3GP09693 182 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 SCAND1P57086 179 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 LOXL3P58215 753 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms