RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 RAB9BQ9NP90 201 aa13.64□□□□□ -0.23
CCDC90B-202ENST00000455220 MMP26Q9NRE1 261 aa13.64□□□□□ -0.23
CCDC90B-202ENST00000455220 ZANQ9Y493 2812 aa13.64□□□□□ -0.23
CCDC90B-202ENST00000455220 IGKV1-6A0A0C4DH72 117 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 C17orf98A8MV24 154 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 SPINT2O43291 252 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 UPK1BO75841 260 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 CD74P04233 296 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 IGHV4-31P0DP07 118 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 TBPP20226 339 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 TAS2R46P59540 309 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 KLF9Q13886 244 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 HERPUD1Q15011 391 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 HEPN1Q6WQI6 88 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 CIARTQ8N365 385 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 OR10A7Q8NGE5 316 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 OR1L1Q8NH94 360 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 DEDD2Q8WXF8 326 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 LPAR2Q9HBW0 351 aa13.63□□□□□ -0.23
CCDC90B-202ENST00000455220 ZNF736B4DX44 427 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 M0R1W7 72 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 CD3DP04234 171 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 HLA-DMAP28067 261 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 GZMKP49863 264 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 AP3S2P59780 193 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 HTD2P86397 168 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 TMEM30BQ3MIR4 351 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 ACTBL2Q562R1 376 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 IGSF11Q5DX21 431 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 C1orf122Q6ZSJ8 110 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 PRR18Q8N4B5 295 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 TOMM5Q8N4H5 51 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 RFESDQ8TAC1 157 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 UBALD1Q8TB05 177 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 BORCS5Q969J3 196 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 GALMQ96C23 342 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 MSI2Q96DH6 328 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 KIRREL1Q96J84 757 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 INSIG2Q9Y5U4 225 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 KPTNQ9Y664 436 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 ABCA1O95477 2261 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 TRAV20A0A0B4J274 112 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 MMP23AO75900 390 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 CTXN2P0C2S0 81 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 FPR2P25090 351 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 HRH1P35367 487 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 ARPC4P59998 168 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 IFITM3Q01628 133 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 CDK10Q15131 360 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 CHRFAM7AQ494W8 412 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 VAX1Q5SQQ9 334 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 BTNL3Q6UXE8 466 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 OVCH2Q7RTZ1 564 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 Q8N7P7 452 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 COX4I2Q96KJ9 171 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 ABCB10Q9NRK6 738 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 IDI2-AS1Q9NZ38 188 aa13.62□□□□□ -0.23
CCDC90B-202ENST00000455220 TRBV6-7A0A0A0MS04 114 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 OMGP23515 440 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 DVL1P1P54792 670 aaPredicted RBP13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 LOXL3P58215 753 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 PAX8Q06710 450 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 DYRK1AQ13627 763 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 PRAMEF5Q5TYX0 476 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 STEAP3Q658P3 488 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 STEAP1BQ6NZ63 245 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 OR52M1Q8NGK5 317 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 OR5H2Q8NGV7 314 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 TMEM186Q96B77 213 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 TOLLIPQ9H0E2 274 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 NECAP2Q9NVZ3 263 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 ONECUT1Q9UBC0 465 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 JPT1Q9UK76 154 aa13.61□□□□□ -0.23
CCDC90B-202ENST00000455220 hCG_1809904A0A1W2PP81 198 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 A0A1W2PPE2 198 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 A0A1W2PR64 198 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 A0A1W2PRV1 198 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 PMP2P02689 132 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 AKAIN1P0CW23 69 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 IGHV1-8P0DP01 117 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 MMP9P14780 707 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 GATA3P23771 443 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 INPP1P49441 399 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 ERVFRD-1P60508 538 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 ARF6P62330 175 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 RNASE10Q5GAN6 216 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 ZNF57Q68EA5 555 aaPredicted RBP13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 SPNS3Q6ZMD2 512 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 IL1F10Q8WWZ1 152 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 SIRPDQ9H106 197 aa13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 UNKLQ9H9P5 680 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-202ENST00000455220 A0A087X0M5 115 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 A0A1B0GX30 115 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 M0QYG6 137 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 RAB3DO95716 219 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 OR5H8P0DN80 308 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 OR3A3P47888 321 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 RFX2P48378 723 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 MEF2DQ14814 521 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 LURAP1LQ8IV03 231 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms