RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 TOMM40LQ969M1 308 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 RPEQ96AT9 228 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 SULT4A1Q9BR01 284 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 FAAP24Q9BTP7 215 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 TM2D1Q9BX74 207 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 TMEM59Q9BXS4 323 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 PRSS22Q9GZN4 317 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 Q9H521 79 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 SERTAD4Q9NUC0 356 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 GFOD1Q9NXC2 390 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 SLC17A2O00624 439 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 MRPS14O60783 128 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 HBZP02008 142 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 VSIG10L2P0DP72 767 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 CHATP28329 748 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 MADCAM1Q13477 382 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 HERPUD1Q15011 391 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 P2RY14Q15391 338 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 NKAPLQ5M9Q1 402 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 C6orf183Q5T699 404 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 HIST2H2BDQ6DRA6 164 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 CCDC144NLQ6NUI1 221 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 C6orf201Q7Z4U5 140 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 C5orf24Q7Z6I8 188 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 SPARTQ8N0X7 666 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 KLHDC1Q8N7A1 406 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 OR10X1Q8NGY0 326 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 OR1L1Q8NH94 360 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 MRPL30Q8TCC3 161 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 CAPSLQ8WWF8 208 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 RBM14Q96PK6 669 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 NEDD4LQ96PU5 975 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 NICN1Q9BSH3 213 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 LIN7BQ9HAP6 207 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 PLGRKTQ9HBL7 147 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 LRRC42Q9Y546 428 aa10.19□□□□□ -0.78
PRPF40A-203ENST00000448428 A0A0A6YYD4 124 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 A0A1W2PPI3 338 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 FAM90A9PA6NNJ1 464 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 M0QZ24 198 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 SPINT2O43291 252 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 ARSBP15848 533 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 RAB7AP51149 207 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 ZNF134P52741 427 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 UBE2UQ5VVX9 321 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 TRAT1Q6PIZ9 186 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 CD200R1LQ6Q8B3 271 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 Q6ZTK2 550 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 C16orf82Q7Z2V1 217 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 THNSL2Q86YJ6 484 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 PRR18Q8N4B5 295 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 LINC00311Q8N616 119 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 DRAM1Q8N682 238 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 C11orf44Q8N8P7 122 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 C8orf31Q8N9H6 132 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 OR51D1Q8NGF3 324 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 CFHR4Q92496 578 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 OCSTAMPQ9BR26 566 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 SLC25A33Q9BSK2 321 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 YTHDF1Q9BYJ9 559 aaKnown RBP10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 LPAR5Q9H1C0 372 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 TAF9BQ9HBM6 251 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 MBNL3Q9NUK0 354 aaKnown RBP10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 NDUFB11Q9NX14 153 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 RRP15Q9Y3B9 282 aaKnown RBP10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 V9GY05 133 aa10.18□□□□□ -0.78
PRPF40A-203ENST00000448428 TRAV1-2A0A0B4J238 106 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 TRDV1A0A1B0GX56 115 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 SHISA3A0PJX4 238 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 SLC31A2O15432 143 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 OR2F2O95006 317 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 AMY1AP04745 511 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 AMY2AP04746 511 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 SNRNP70P08621 437 aaKnown RBP10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 FAM106CPP0CH98 169 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 BLVRBP30043 206 aaPredicted RBP10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 CLDN12P56749 244 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 ZNF816Q0VGE8 651 aaPredicted RBP10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 RAB11BQ15907 218 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 C2orf76Q3KRA6 126 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 Q3ZCU0 254 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 OR2W3Q7Z3T1 314 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 OR8H3Q8N146 312 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 SVOPQ8N4V2 548 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 FAM89BQ8N5H3 189 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 ZNF439Q8NDP4 499 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 OR56B4Q8NH76 319 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 ST6GALNAC6Q969X2 333 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 AKR1E2Q96JD6 320 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 RAB9BQ9NP90 201 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 KCNIP1Q9NZI2 227 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 GNG12Q9UBI6 72 aa10.17□□□□□ -0.78
PRPF40A-203ENST00000448428 SH2D7A6NKC9 451 aaPredicted RBP10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 CCRL2O00421 344 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 HSD17B6O14756 317 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 SOCS1O15524 211 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 TSPAN15O95858 294 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 GAPDHP04406 335 aaKnown RBP10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 REG1BP48304 166 aa10.16□□□□□ -0.78
PRPF40A-203ENST00000448428 PSMD7P51665 324 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms